Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2195 |
Symbol | |
ID | 8013206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 2194331 |
End bp | 2195515 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644824781 |
Product | protein of unknown function DUF140 |
Protein accession | YP_002976011 |
Protein GI | 241204915 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein [TIGR00377] anti-anti-sigma factor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.130725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.119918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCTGC AAGCCTTGAA AGACATAAGT ATCTTGAACG CCGAAAATCG CAACGCCGCC TCCCTTGATG TGGACGACCA GGCTGATGGC TCGGGACAGC GTGTGCGTCT TCAGGGCAAT TGGCGCAGCG CCTACATCCA TCTGGTGCTA CGCGATTTCG AAAAGCTCCT GCAGAAGAAG ACTGGCGACC TGACGGTAGA CCTCTCGGAT ATTTCGGAGA TCGACACCGC CGGCATCTGG CTACTGTGCC GGTTGAAGAA GCAAGAAGAG GCGGGCGGGC GGACGGTTCG CTTCGAAGGC ACCAACTCGC ATATCGACGA AATGCTGGAG ATGGTTTCCG AGGAGCCGGC CAAGGTCGAG CCGGAGCAGA CGGAGAAAGT CTCGCTTGCC GCGCGCATCT TCGCGCCGAT CGGCAAAATG ACCTACGAGG TCTGGGACAA TTTCGCCGCC GCCATGTATA TCCTCGGCTC GGCGGTGCGC GGCGCGCAGA TGAAGTTCGG CCGCGGCAGT GGCGTTTCAC CGGCCTCGAT CGTCAACCAG ATCGACCATA TGGGCGTTCG CGCCGTTCCG ATCATCTTGC TGATGTCTTT CCTGATCGGG GCGATCATCG CCCAGCAGGG CGCCTTCCAG CTGCGTTACT TCGGCGCTGA GGTTTTCGTC GTCGATCTCG TCGGCATCCT GCAATTGCGC GAAATCGGCG TGCTTCTGAC TTCGATCATG ATCGCCGGCC GCTCGGGCAG CGCCATCACC GCCGAAATCG GTTCGATGAA GATGCGCGAA GAGATCGACG CGCTGAAGGT GATGGGGCTG AACCCGATCG GCGTGCTGAT CTTTCCGCGG CTGGTGGCGC TGACCATTGC GCTGCCGCTT TTGACGGTGC TGGCGAATTT CGCTTCTCTG GGCGGTGCTG CCGCTGTCGC CTGGGGCTAT TCCGGCATCA CCTTCGCCAA TTTCCTGTCG CGCCTCCACG AGGCGGTCAC ATTGTCGACG GTGCTGTCAG GCATGATCAA GGCGCCGTTC ATGGCGCTGG TCATCGGCAT CGTCGCCGCC GTCGAGGGGC TGAAGGTTGG CGGCAGCGCG GAATCGCTCG GCCAGCACGT GACGGCCGCG GTGGTGAAGG CGATTTTCGT CGTCATCCTG ATGGACGGGC TTTTTGCGAT GTTCTATGCA GCGATCGATT TCTAG
|
Protein sequence | MSLQALKDIS ILNAENRNAA SLDVDDQADG SGQRVRLQGN WRSAYIHLVL RDFEKLLQKK TGDLTVDLSD ISEIDTAGIW LLCRLKKQEE AGGRTVRFEG TNSHIDEMLE MVSEEPAKVE PEQTEKVSLA ARIFAPIGKM TYEVWDNFAA AMYILGSAVR GAQMKFGRGS GVSPASIVNQ IDHMGVRAVP IILLMSFLIG AIIAQQGAFQ LRYFGAEVFV VDLVGILQLR EIGVLLTSIM IAGRSGSAIT AEIGSMKMRE EIDALKVMGL NPIGVLIFPR LVALTIALPL LTVLANFASL GGAAAVAWGY SGITFANFLS RLHEAVTLST VLSGMIKAPF MALVIGIVAA VEGLKVGGSA ESLGQHVTAA VVKAIFVVIL MDGLFAMFYA AIDF
|
| |