Gene Rleg_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2195 
Symbol 
ID8013206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2194331 
End bp2195515 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content61% 
IMG OID644824781 
Productprotein of unknown function DUF140 
Protein accessionYP_002976011 
Protein GI241204915 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein
[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.130725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.119918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGC AAGCCTTGAA AGACATAAGT ATCTTGAACG CCGAAAATCG CAACGCCGCC 
TCCCTTGATG TGGACGACCA GGCTGATGGC TCGGGACAGC GTGTGCGTCT TCAGGGCAAT
TGGCGCAGCG CCTACATCCA TCTGGTGCTA CGCGATTTCG AAAAGCTCCT GCAGAAGAAG
ACTGGCGACC TGACGGTAGA CCTCTCGGAT ATTTCGGAGA TCGACACCGC CGGCATCTGG
CTACTGTGCC GGTTGAAGAA GCAAGAAGAG GCGGGCGGGC GGACGGTTCG CTTCGAAGGC
ACCAACTCGC ATATCGACGA AATGCTGGAG ATGGTTTCCG AGGAGCCGGC CAAGGTCGAG
CCGGAGCAGA CGGAGAAAGT CTCGCTTGCC GCGCGCATCT TCGCGCCGAT CGGCAAAATG
ACCTACGAGG TCTGGGACAA TTTCGCCGCC GCCATGTATA TCCTCGGCTC GGCGGTGCGC
GGCGCGCAGA TGAAGTTCGG CCGCGGCAGT GGCGTTTCAC CGGCCTCGAT CGTCAACCAG
ATCGACCATA TGGGCGTTCG CGCCGTTCCG ATCATCTTGC TGATGTCTTT CCTGATCGGG
GCGATCATCG CCCAGCAGGG CGCCTTCCAG CTGCGTTACT TCGGCGCTGA GGTTTTCGTC
GTCGATCTCG TCGGCATCCT GCAATTGCGC GAAATCGGCG TGCTTCTGAC TTCGATCATG
ATCGCCGGCC GCTCGGGCAG CGCCATCACC GCCGAAATCG GTTCGATGAA GATGCGCGAA
GAGATCGACG CGCTGAAGGT GATGGGGCTG AACCCGATCG GCGTGCTGAT CTTTCCGCGG
CTGGTGGCGC TGACCATTGC GCTGCCGCTT TTGACGGTGC TGGCGAATTT CGCTTCTCTG
GGCGGTGCTG CCGCTGTCGC CTGGGGCTAT TCCGGCATCA CCTTCGCCAA TTTCCTGTCG
CGCCTCCACG AGGCGGTCAC ATTGTCGACG GTGCTGTCAG GCATGATCAA GGCGCCGTTC
ATGGCGCTGG TCATCGGCAT CGTCGCCGCC GTCGAGGGGC TGAAGGTTGG CGGCAGCGCG
GAATCGCTCG GCCAGCACGT GACGGCCGCG GTGGTGAAGG CGATTTTCGT CGTCATCCTG
ATGGACGGGC TTTTTGCGAT GTTCTATGCA GCGATCGATT TCTAG
 
Protein sequence
MSLQALKDIS ILNAENRNAA SLDVDDQADG SGQRVRLQGN WRSAYIHLVL RDFEKLLQKK 
TGDLTVDLSD ISEIDTAGIW LLCRLKKQEE AGGRTVRFEG TNSHIDEMLE MVSEEPAKVE
PEQTEKVSLA ARIFAPIGKM TYEVWDNFAA AMYILGSAVR GAQMKFGRGS GVSPASIVNQ
IDHMGVRAVP IILLMSFLIG AIIAQQGAFQ LRYFGAEVFV VDLVGILQLR EIGVLLTSIM
IAGRSGSAIT AEIGSMKMRE EIDALKVMGL NPIGVLIFPR LVALTIALPL LTVLANFASL
GGAAAVAWGY SGITFANFLS RLHEAVTLST VLSGMIKAPF MALVIGIVAA VEGLKVGGSA
ESLGQHVTAA VVKAIFVVIL MDGLFAMFYA AIDF