Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2173 |
Symbol | |
ID | 8013186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 2166254 |
End bp | 2168857 |
Gene Length | 2604 bp |
Protein Length | 867 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644824759 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_002975989 |
Protein GI | 241204893 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00129243 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0294734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAC CGCGTCAGGC CGACGACTAT AACGCACCGC TTGTGGATCG TGGGGGGCGT TCTGGCACGG TCTTGCGCAT TCTTCTGCTG GCGCTCGTGC TGATTGCGGC TGCCGGCGCC TTCGTCTTCT TCAAAAAATC GCTCGACAAC GAGGTCGTGC TTGGCGGCCT CGGCGTGCTC GCCATGGTCG GCATCTTCTT CCTGGTGTCC TCGGTCATCG GCTTCATCGA GGTGATGCCG CAGCGCCAGT CCGACAGCCT GGCGCGCGCC TTCCTCAACA GCCATCCCGA CGGTACGCTG ATCACCGACG AAAAAGGCCG GATCATCTAT GCCAATGCCG CCTATGGCGC GCTGACCGGC GCGCGCAAGG CGACCGAGGT GCAGACGCTG GAAACGCTGC TGTCGCGCCA CCGCGAATCC AACGAGGCGC TCTACCGGCT GGTCAACGGC CTGCGCGAGG GCAAGGAAGG CCGGGAGGAA TTTCGCCTGC TGCGCGCCGT CGGGCCTGGC AGCAACAGCT CCGGCGCGCA TTGGTACCGG CTGAAGGCGC GGCTGCTGCA GCCGGAGGAA AACGGCGGCC AGCCGCTGCA GATCTGGCAG ATCACCGACA TCACCACGGA GCGCGACGAC CAGGAGCGCT TCTTCAAGGA ATTGCAGAAC GCGATCGATT ATCTCGACCA CGCGCCGGCC GGCTTCTTTT CCGCCGGCAG GAAGGGCGAG ATCTTCTACC TGAATGCGAC GCTTGCCGAA TGGCTGGGCC TCGACCTCAC CAAGTTCGTG CCGGGCTCGA TGACGATCGG CGACGTCGTG GCGGGCGAGG GACTGGCGCT GATCCAGTCG GTGCAGGCCG AACCGGGCCT GAAGAAGACC GTGACGCTCG ATCTCGACCT GCGCAAGAGC AACGGCCAGA GCCTGCCGGT ACAGATCGTC CACAGCGTCA CCTCGATGCG CGACGGCGCA CCCGGCGAAA GCCGGACGAT CGTGCTGGCG CGTGAAAAGG GCGATGCCGG CGGCCAGTCC GCTTCGGCCG CCGCCATGCG CTTCACCCGC TTCTTCAACA ATACGCCGAT GGCGATCGCC TCGGTCGACG GCAACGGGCG CATCTTGCGA ACCAATGCGC CGTTCCTGAA GATGTTCTCC GGCGTCGTCT CTCGCGACGA TCTCGAAAAG GCGCCGCATC TTGAAACCAT CGTGCAGGAA AGCGACCGGC CACAGCTGGC CGCGGCGCTG GCGGCGGCCA AGGATCGGCA GGGCGACATC GCGCCGCTCG ACACCCGCAC ACCGACCGAC GAGGCGCGCT ATTTCCGCTT CTATGTCAAT GCCGTCATCG ACCAGAGCGA CGAGGCGCCC GAGGAAGCGG CGATCGTCTA TGCCGTCGAG GTGACCGAGC AGAAGGCGCT GGAAGCGCAG ATGGCGCAGA CGCAGAAGAT GAATGCGGTC GGAACGCTCG CCGGTGGCAT CGCGCATGAT TTCAACAACG TGCTGACGGC TATCCTGCTT TCCTCCGACC ATCTGCTGCT GCAGGCGCGG CCGGCCGATG CCAGCTTCGC CGATCTGATA GAGATCAAGC GCAACGCCAA CCGCGCCGCA GTGCTGGTGC GCCAGCTGCT CGCCTTCTCA CGCAAGCAGA CGATGCGGCC CTCGGTGCTG AACCTCACCG ATGTCGTCGG CGACCTGCGT ATGCTGGTCG ATCGGCTGCT ATCAGGCACC AATGTCAAGC TCGACGTGCA ATATGGCCGC GACCTCTGGC CTGTCAAAAC AGACCTTTCG CAGTTCGAGC AGGTGCTGAT CAATCTCTGC GTCAATGCGC GCGACGCGAT GCCAGAGGGT GGCACGCTGA CATTGCGCAC CCGAAACCTG ACCGCTGCCG AGGTCTCGGC CTTCAATTAC TCCTACATGC CGGCCGAGGA CATGGTGCTG GTCGAGGTTG CGGATAACGG CACAGGCATC GCACCTGAAA TCATGGACAA GATCTTCGAG CCGTTCTTCA CCACCAAGGA TGTCGGCAAG GGCACCGGTC TTGGCCTCGC CATGGTCTAT GGCATCGTCA AACAGTCGGG CGGCTACATC CAGCCGGAAT CCGAAGTCGG CAAGGGCACG ACCTTCCGCG TCTTCCTGCC GCGCCACATC CCGGAGCCGG CGGTTGCGGC CGAAGCGGGT TCGATCGACG GCGCCATCGC CGGAGCCGAA GTGGTGCCGC TGCCGGTATC GCCGCAGCAG CCCGAGGACC TGACGGGATC GGCCGTCATC CTTCTCGTCG AAGACGAGGA GGCGGTGCGC CGCGGCGGCA AGCGCATGCT GGAAACGCGC GGCTACACCG TCCACGAGGC GGGCTCGGGC GTCGAGGCGC TGGCTATCTT GGAAGAACTC GACGGCAAGG TCGACATCGT CGTCTCCGAC GTCGTCATGC CCGAAATGGA CGGCCCGACG CTGCTGCGCG AGCTGCGCAA GACCTATCCC GACATGAAGT TCATATTCGT CTCGGGTTAT GCCGAAGATG CCTTTGCCCG CAACCTGCCG CCGGAAGCGA AATTTGGCTT CCTGCCGAAG CCGTTTTCGC TGAAACAGCT TGCTGTCGTC GTCAAGGAGA CGCTGGACGG GTGA
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Protein sequence | MTKPRQADDY NAPLVDRGGR SGTVLRILLL ALVLIAAAGA FVFFKKSLDN EVVLGGLGVL AMVGIFFLVS SVIGFIEVMP QRQSDSLARA FLNSHPDGTL ITDEKGRIIY ANAAYGALTG ARKATEVQTL ETLLSRHRES NEALYRLVNG LREGKEGREE FRLLRAVGPG SNSSGAHWYR LKARLLQPEE NGGQPLQIWQ ITDITTERDD QERFFKELQN AIDYLDHAPA GFFSAGRKGE IFYLNATLAE WLGLDLTKFV PGSMTIGDVV AGEGLALIQS VQAEPGLKKT VTLDLDLRKS NGQSLPVQIV HSVTSMRDGA PGESRTIVLA REKGDAGGQS ASAAAMRFTR FFNNTPMAIA SVDGNGRILR TNAPFLKMFS GVVSRDDLEK APHLETIVQE SDRPQLAAAL AAAKDRQGDI APLDTRTPTD EARYFRFYVN AVIDQSDEAP EEAAIVYAVE VTEQKALEAQ MAQTQKMNAV GTLAGGIAHD FNNVLTAILL SSDHLLLQAR PADASFADLI EIKRNANRAA VLVRQLLAFS RKQTMRPSVL NLTDVVGDLR MLVDRLLSGT NVKLDVQYGR DLWPVKTDLS QFEQVLINLC VNARDAMPEG GTLTLRTRNL TAAEVSAFNY SYMPAEDMVL VEVADNGTGI APEIMDKIFE PFFTTKDVGK GTGLGLAMVY GIVKQSGGYI QPESEVGKGT TFRVFLPRHI PEPAVAAEAG SIDGAIAGAE VVPLPVSPQQ PEDLTGSAVI LLVEDEEAVR RGGKRMLETR GYTVHEAGSG VEALAILEEL DGKVDIVVSD VVMPEMDGPT LLRELRKTYP DMKFIFVSGY AEDAFARNLP PEAKFGFLPK PFSLKQLAVV VKETLDG
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