Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2164 |
Symbol | |
ID | 8015651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2155075 |
End bp | 2156286 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644824750 |
Product | isocitrate dehydrogenase |
Protein accession | YP_002975980 |
Protein GI | 241204884 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0263756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0589058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA TCAAGGTCGC AAATCCCGTC GCCGATCTCG ACGGCGATGA AATGACGCGC ATCATCTGGC AGCTCATCAA GGATAAGCTG ATCCATCCGT ATCTTGACCT CGACATCGAC TATTTCGACC TCTCGGTCGA AAACCGCGAC GCCACCAACG ACCAGGTCAC CGTCGACGCC GCCAACGCCA TCAAGAAATA CGGCGTCGGC ATCAAGTGCG CGACGATCAC GCCGGATGAA GACCGCGTCA AGGAATTCAA TCTCAAGCAG ATGTGGAAGA GCCCGAACGG CACGATCCGC AACATTCTCG GCGGCGTCAT CTTCCGCGAG CCGATCATTT GCCAGAACGT GCCGCGCCTC GTTCCCGGCT GGACCAAGCC GATCGTTGTC GGTCGTCATG CCTTCGGCGA CCAGTACCGT GCCACCGACT TCCGCTTCCC CGGCAAGGGC AAGCTGACGA TCAAGTTCGT CGGTGAAGAC GGCACGGTTA TCGAGAAGGA CGTCTTCGAC GCCCCCGGCT CCGGCGTTGC CATGGCCATG TACAATCTCG ACGAGTCGAT CCGCGAATTC GCCCGCGCCT CAATGATGTA CGGCCTGATG CGTAAGTGGC CGGTTTATCT GTCGACCAAG AACACCATCC TCAAGGCCTA TGACGGTCGC TTCAAGGACA TCTTCGAAGA GGTGTACCAG ACCGAATTCA AGGATCAGTT CAAGGAAGCC GGCATCACTT ACGAACACCG CCTGATCGAC GACATGGTCG CCTCGGCGCT GAAGTGGTCG GGCGGCTATG TCTGGGCCTG CAAGAATTAT GACGGCGACG TCCAGTCCGA CACCGTAGCC CAGGGCTTCG GCTCGCTCGG CCTGATGACC TCGGTTCTCT TGACGCCCGA CGGCAAGACG GTCGAAGCCG AAGCCGCCCA CGGCACGGTG ACGCGTCACT ATCGCCAGCA CCAGAAGGGC CAGGAAACTT CGACGAACTC GATCGCCTCG ATCTTCGCCT GGACCCGTGG CCTGGCGCAC CGCGCCAAGC TCGACGACAA TGCCGAGCTC GCCCGCTTCT CCTCGACGCT GGAAAAGGTC TGCGTCGACA CCGTCGAATC CGGCTTCATG ACCAAGGACC TGGCGCTGCT GATCGGCCCC GACCAGCCGT GGCTGTCGAC CACCGCCTTC CTCGACAAGA TCGACGAGAA CCTGCAGAAG GCCATGGCGT AA
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Protein sequence | MNKIKVANPV ADLDGDEMTR IIWQLIKDKL IHPYLDLDID YFDLSVENRD ATNDQVTVDA ANAIKKYGVG IKCATITPDE DRVKEFNLKQ MWKSPNGTIR NILGGVIFRE PIICQNVPRL VPGWTKPIVV GRHAFGDQYR ATDFRFPGKG KLTIKFVGED GTVIEKDVFD APGSGVAMAM YNLDESIREF ARASMMYGLM RKWPVYLSTK NTILKAYDGR FKDIFEEVYQ TEFKDQFKEA GITYEHRLID DMVASALKWS GGYVWACKNY DGDVQSDTVA QGFGSLGLMT SVLLTPDGKT VEAEAAHGTV TRHYRQHQKG QETSTNSIAS IFAWTRGLAH RAKLDDNAEL ARFSSTLEKV CVDTVESGFM TKDLALLIGP DQPWLSTTAF LDKIDENLQK AMA
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