Gene Rleg_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2164 
Symbol 
ID8015651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2155075 
End bp2156286 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content60% 
IMG OID644824750 
Productisocitrate dehydrogenase 
Protein accessionYP_002975980 
Protein GI241204884 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0263756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0589058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA TCAAGGTCGC AAATCCCGTC GCCGATCTCG ACGGCGATGA AATGACGCGC 
ATCATCTGGC AGCTCATCAA GGATAAGCTG ATCCATCCGT ATCTTGACCT CGACATCGAC
TATTTCGACC TCTCGGTCGA AAACCGCGAC GCCACCAACG ACCAGGTCAC CGTCGACGCC
GCCAACGCCA TCAAGAAATA CGGCGTCGGC ATCAAGTGCG CGACGATCAC GCCGGATGAA
GACCGCGTCA AGGAATTCAA TCTCAAGCAG ATGTGGAAGA GCCCGAACGG CACGATCCGC
AACATTCTCG GCGGCGTCAT CTTCCGCGAG CCGATCATTT GCCAGAACGT GCCGCGCCTC
GTTCCCGGCT GGACCAAGCC GATCGTTGTC GGTCGTCATG CCTTCGGCGA CCAGTACCGT
GCCACCGACT TCCGCTTCCC CGGCAAGGGC AAGCTGACGA TCAAGTTCGT CGGTGAAGAC
GGCACGGTTA TCGAGAAGGA CGTCTTCGAC GCCCCCGGCT CCGGCGTTGC CATGGCCATG
TACAATCTCG ACGAGTCGAT CCGCGAATTC GCCCGCGCCT CAATGATGTA CGGCCTGATG
CGTAAGTGGC CGGTTTATCT GTCGACCAAG AACACCATCC TCAAGGCCTA TGACGGTCGC
TTCAAGGACA TCTTCGAAGA GGTGTACCAG ACCGAATTCA AGGATCAGTT CAAGGAAGCC
GGCATCACTT ACGAACACCG CCTGATCGAC GACATGGTCG CCTCGGCGCT GAAGTGGTCG
GGCGGCTATG TCTGGGCCTG CAAGAATTAT GACGGCGACG TCCAGTCCGA CACCGTAGCC
CAGGGCTTCG GCTCGCTCGG CCTGATGACC TCGGTTCTCT TGACGCCCGA CGGCAAGACG
GTCGAAGCCG AAGCCGCCCA CGGCACGGTG ACGCGTCACT ATCGCCAGCA CCAGAAGGGC
CAGGAAACTT CGACGAACTC GATCGCCTCG ATCTTCGCCT GGACCCGTGG CCTGGCGCAC
CGCGCCAAGC TCGACGACAA TGCCGAGCTC GCCCGCTTCT CCTCGACGCT GGAAAAGGTC
TGCGTCGACA CCGTCGAATC CGGCTTCATG ACCAAGGACC TGGCGCTGCT GATCGGCCCC
GACCAGCCGT GGCTGTCGAC CACCGCCTTC CTCGACAAGA TCGACGAGAA CCTGCAGAAG
GCCATGGCGT AA
 
Protein sequence
MNKIKVANPV ADLDGDEMTR IIWQLIKDKL IHPYLDLDID YFDLSVENRD ATNDQVTVDA 
ANAIKKYGVG IKCATITPDE DRVKEFNLKQ MWKSPNGTIR NILGGVIFRE PIICQNVPRL
VPGWTKPIVV GRHAFGDQYR ATDFRFPGKG KLTIKFVGED GTVIEKDVFD APGSGVAMAM
YNLDESIREF ARASMMYGLM RKWPVYLSTK NTILKAYDGR FKDIFEEVYQ TEFKDQFKEA
GITYEHRLID DMVASALKWS GGYVWACKNY DGDVQSDTVA QGFGSLGLMT SVLLTPDGKT
VEAEAAHGTV TRHYRQHQKG QETSTNSIAS IFAWTRGLAH RAKLDDNAEL ARFSSTLEKV
CVDTVESGFM TKDLALLIGP DQPWLSTTAF LDKIDENLQK AMA