| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2115 |
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| Symbol | |
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| ID | 8013138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 2105623 |
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| End bp | 2107284 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644824701 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002975931 |
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| Protein GI | 241204835 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.232775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0296214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACG ACCTCTGGTA TAAGAACGCT GTCATTTACT GCCTGTCCGT CGAGACCTTC
ATGGATGCGA ACGGTGACGG CGTCGGTGAT TTTCAGGGTC TGATGCGGCG CCTCGATTAT
CTCTCCGGCC TCGGCGTGAC GGCGATCTGG CTCATGCCGT TCCAGGCATC GCCCGGTCGC
GACGACGGTT ATGACGTCTC CGATTATTAC AATGTCGATC CGCGTTATGG TTCGCTCGGC
GATTTCGTCG AATTCACCCA CGGCGCCAAG CAGCGCGGTA TCCGGGTACT GATCGATCTG
GTGATCAATC ATACATCCAA AGACCATCCC TGGTTCCAGG ACGCCAGGAG CGATCCGCGT
TCGCGCTATC GCGACTGGTA CGTCTGGTCG GAGAGAAAAC CTGATAATGC CGATCAGGGC
ATGGTCTTCC CCGGCGTCCA GAAGACCACT TGGACCTATG ACGATAGAGC CAAGGCCTAT
TACTTTCACC GCTTCTACGA TCACCAGCCC GATCTCAATA CATCGAACCC CGAGGTGCAG
GCAGAAATCC TGAAGATCAT GGGCTTCTGG ATCCAGCTCG GCGTCTCCGG CTTCCGAATG
GATGCCGCCC CCTTCATCAT CGCAACGAAA GGCGCCGACG TTACCAAGCC TGTCGAACAG
TTCGATATGC TGAGGAAATT TCGCGAATTC CTGCAGTGGC GGCTGGGCGA TTCCATCATC
CTGGCAGAGG CCAACATCCT GCCGAAGGAC AATTTCGAAT ATTTCGGCGA TGACGGCGAC
CGCATGCAGA TGATGTTCAA TTTCCAGGTC AATCAAGCGC TATTTTATGC TTTCGCCAGC
GCCGATACCC GGCCGCTCAA GAAGGCCATG GAGGCCACCA AACCGCGCCC TGCGACCGCG
CAATGGGGCC TCTTTCTCCG CAACCATGAT GAACTGGATC TCGGCCGGCT GACGGAAAAA
CAACGCGCCG CGGTATTTGC CGCCTTCGGG CCTGAAAAGG ACATGCAGCT TTACGACAGG
GGCATTCGCC GTCGCCTCGC GCCCATGCTC GGCGGCGACC ACCGCAGGAT CGAAATGGCC
TACAGCCTGC TGTTTTCACT GCCTGGAACG CCCGTCATCC GATACGGCGA CGAAATCGGC
ATGGGCGACG ATCTAGGCCT GCCCGAGCGC AATTGCGCAC GCACGCCGAT GCAGTGGTCG
ACCGAACCGG AAGGCGGGTT CACCAAAAGT GAAAAGCCGA TCTCGCCCGT TATCAAGGAC
GGTCCCTACG GTTTCCAGCA TGTCAATGTT GCCGAACAGC GGCGCGATCC CAATTCTTTG
CTGAACTGGA CCGAGCGGAT GATCCGGATG CGCAAGGAAG CCCCTGAGAT CGGCTGGGGC
GACTTTTCTG TAATCGACAC CGGGGATGAC GGCGTGCTGG CGCTTCGTTA TGACTGGCGC
GGCAATTCCG TGTTGATCCT GCACAATCTG CATGCGCAGC CGGCGGAAGT GACCTTCGAT
CCCGAGATAG GCGAAGACGG GCGGCAATTA ATCGATATCG CCGATGGCGC GAGCAGCAAA
GCGGACGAAA AAGGATTTCA TACCGTCATG CTCGATGCCT ACGGCTATCG CTGGTATCGC
GTCGGCGGTC TCGATTATCT CCTCAGGCGG ACGGAGATTT AG
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| Protein sequence | MINDLWYKNA VIYCLSVETF MDANGDGVGD FQGLMRRLDY LSGLGVTAIW LMPFQASPGR
DDGYDVSDYY NVDPRYGSLG DFVEFTHGAK QRGIRVLIDL VINHTSKDHP WFQDARSDPR
SRYRDWYVWS ERKPDNADQG MVFPGVQKTT WTYDDRAKAY YFHRFYDHQP DLNTSNPEVQ
AEILKIMGFW IQLGVSGFRM DAAPFIIATK GADVTKPVEQ FDMLRKFREF LQWRLGDSII
LAEANILPKD NFEYFGDDGD RMQMMFNFQV NQALFYAFAS ADTRPLKKAM EATKPRPATA
QWGLFLRNHD ELDLGRLTEK QRAAVFAAFG PEKDMQLYDR GIRRRLAPML GGDHRRIEMA
YSLLFSLPGT PVIRYGDEIG MGDDLGLPER NCARTPMQWS TEPEGGFTKS EKPISPVIKD
GPYGFQHVNV AEQRRDPNSL LNWTERMIRM RKEAPEIGWG DFSVIDTGDD GVLALRYDWR
GNSVLILHNL HAQPAEVTFD PEIGEDGRQL IDIADGASSK ADEKGFHTVM LDAYGYRWYR
VGGLDYLLRR TEI
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