Gene Rleg_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1993 
Symbol 
ID8013029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1990882 
End bp1991592 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content65% 
IMG OID644824580 
Productthymidylate kinase 
Protein accessionYP_002975812 
Protein GI241204716 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00307533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCGGCGCC TGGAATGCGG GAAGTTGTCA TTGTCATCCG GTACGGGATT GTTCGTTACG 
TTTGAAGGCG GGGAAGGCGC GGGGAAATCC ACGCAGATCC GCCGCCTCGC CGAGGCGCTG
AAGGGCGAAG GTCACGACGT GCTGATGACG CGCGAACCAG GCGGATCGCC GGGCGCGGAG
GCCGTGCGCC ACGTGCTGCT GTCGGGAGCT GCCGAAGCCT TCGGCACGCG GATGGAAGCG
ATCCTCTTTG CCGCGGCGCG CAACGACCAT GTCGAAGAGG TGATCCGGCC GGCCCTCGCA
TCGGGCAAGG TCGTGCTCTG CGACCGCTTC ATGGATTCCT CCCGCGTCTA CCAGGGCATC
ACCGGCAATC TCGAGCCTGA TTTCATCGAG ACGCTGCAGC GCATCGCCAT CAACGGCGTC
ATGCCGGATT GCACCGTGAT CCTCGACATC CCCGCCAAAG TCGGGCTGGA GAGGGCGCAG
AAGCGCGCCG CGGCCGATGC TCCCGATCGC TTCGAGAAGG AGCGGCTGGA AACGCACGAA
AAACGGCGCG AGGCCTTTCT CGATATCGCC GCCCGCGAAC CGGAGCGCTG CCACGTGGTC
AACGCCATGC AGAGCGAGGA GGCGATCGCC GCCGAGATCC TGGCGATCGT CCAACAGCTG
CTGTCGCCGT CAGGCCGTTT GCGAATGCCG GAAGCCGCCC ATCATGAGTG A
 
Protein sequence
MRRLECGKLS LSSGTGLFVT FEGGEGAGKS TQIRRLAEAL KGEGHDVLMT REPGGSPGAE 
AVRHVLLSGA AEAFGTRMEA ILFAAARNDH VEEVIRPALA SGKVVLCDRF MDSSRVYQGI
TGNLEPDFIE TLQRIAINGV MPDCTVILDI PAKVGLERAQ KRAAADAPDR FEKERLETHE
KRREAFLDIA AREPERCHVV NAMQSEEAIA AEILAIVQQL LSPSGRLRMP EAAHHE