Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1983 |
Symbol | |
ID | 8015627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1981168 |
End bp | 1981989 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644824570 |
Product | UspA domain protein |
Protein accession | YP_002975802 |
Protein GI | 241204706 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0316321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0164528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGC AATTCCATTT ACCGCTGGCC ACCTATCCAG ACGCAAGCTC CTTCTCGCTC CTTCAGAATG CTGTCGATGT TTCCCTTCAC CAACAGGCCG GTTTAACGGC AAGTATACCG CAGATCAGGA TCGAACCCGT TCAGCCGCGA TTTCCATCAC TCCTTGACAT AGACAAAATG CGCGTGGAGG CGGAGCGCTT GAGTAGAGAC AATGGTACGG TTCTCGGGCA GACGCTCCGT GATTATGCGA AAAAAGCCGA GGTCGAGCTC GAAATCCAGC CATTCGATGT GAGGCAGCCG TTTGTCGCAC AAACTCTTGC CGAGCTCTCG CGCGCATATG ATCTTTCCAT TTTGGAAGCA TCTGAACTGA TGAGGCCGTT GATCGAGAGC GTGCTGTTTG AAAGCGGTCG ACCGCTCCTG CTTTTCCCCC CAGATAATTT CAGCGGCCGG ATCGATGCTG TCGCCGTCGC CTGGGATGGA GGAGCCACTG TCGCGCGAAC ACTGGCGGGT TCCAGATTCT TGCTGGAACA TGTTTCGCGT ATCGTCCTGA TTTCCATCAC CGATGATAAG CAGATTGACG AGCGCAGCCG AGATCACCTT GCGGCTGCGC TTCGGAAGGC TGGTCTTGCC GTCGATGTCG CAGCCGTGCA AGCGAAGGGA GACTCACCGG CCAGCGTCAT TCAAGGCGCA GCCCTGGAAC GCAAGGCAGA CTTGCTCGTC GCCGGCGCGT TCGGTCATTC GAGGCTGCGC GAATTCATCT TGGGAGGGGT CACACGATCG CTGTTGACCC GCCTCGAAAT GCCCACTGTC CTTTGCCACT AA
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Protein sequence | MKAQFHLPLA TYPDASSFSL LQNAVDVSLH QQAGLTASIP QIRIEPVQPR FPSLLDIDKM RVEAERLSRD NGTVLGQTLR DYAKKAEVEL EIQPFDVRQP FVAQTLAELS RAYDLSILEA SELMRPLIES VLFESGRPLL LFPPDNFSGR IDAVAVAWDG GATVARTLAG SRFLLEHVSR IVLISITDDK QIDERSRDHL AAALRKAGLA VDVAAVQAKG DSPASVIQGA ALERKADLLV AGAFGHSRLR EFILGGVTRS LLTRLEMPTV LCH
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