Gene Rleg_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1983 
Symbol 
ID8015627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1981168 
End bp1981989 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content56% 
IMG OID644824570 
ProductUspA domain protein 
Protein accessionYP_002975802 
Protein GI241204706 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0316321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0164528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC AATTCCATTT ACCGCTGGCC ACCTATCCAG ACGCAAGCTC CTTCTCGCTC 
CTTCAGAATG CTGTCGATGT TTCCCTTCAC CAACAGGCCG GTTTAACGGC AAGTATACCG
CAGATCAGGA TCGAACCCGT TCAGCCGCGA TTTCCATCAC TCCTTGACAT AGACAAAATG
CGCGTGGAGG CGGAGCGCTT GAGTAGAGAC AATGGTACGG TTCTCGGGCA GACGCTCCGT
GATTATGCGA AAAAAGCCGA GGTCGAGCTC GAAATCCAGC CATTCGATGT GAGGCAGCCG
TTTGTCGCAC AAACTCTTGC CGAGCTCTCG CGCGCATATG ATCTTTCCAT TTTGGAAGCA
TCTGAACTGA TGAGGCCGTT GATCGAGAGC GTGCTGTTTG AAAGCGGTCG ACCGCTCCTG
CTTTTCCCCC CAGATAATTT CAGCGGCCGG ATCGATGCTG TCGCCGTCGC CTGGGATGGA
GGAGCCACTG TCGCGCGAAC ACTGGCGGGT TCCAGATTCT TGCTGGAACA TGTTTCGCGT
ATCGTCCTGA TTTCCATCAC CGATGATAAG CAGATTGACG AGCGCAGCCG AGATCACCTT
GCGGCTGCGC TTCGGAAGGC TGGTCTTGCC GTCGATGTCG CAGCCGTGCA AGCGAAGGGA
GACTCACCGG CCAGCGTCAT TCAAGGCGCA GCCCTGGAAC GCAAGGCAGA CTTGCTCGTC
GCCGGCGCGT TCGGTCATTC GAGGCTGCGC GAATTCATCT TGGGAGGGGT CACACGATCG
CTGTTGACCC GCCTCGAAAT GCCCACTGTC CTTTGCCACT AA
 
Protein sequence
MKAQFHLPLA TYPDASSFSL LQNAVDVSLH QQAGLTASIP QIRIEPVQPR FPSLLDIDKM 
RVEAERLSRD NGTVLGQTLR DYAKKAEVEL EIQPFDVRQP FVAQTLAELS RAYDLSILEA
SELMRPLIES VLFESGRPLL LFPPDNFSGR IDAVAVAWDG GATVARTLAG SRFLLEHVSR
IVLISITDDK QIDERSRDHL AAALRKAGLA VDVAAVQAKG DSPASVIQGA ALERKADLLV
AGAFGHSRLR EFILGGVTRS LLTRLEMPTV LCH