Gene Rleg_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1975 
Symbol 
ID8013013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1975901 
End bp1976809 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content61% 
IMG OID644824562 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002975794 
Protein GI241204698 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.718981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0815311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTC TCGAAGCAAT GCGCATATTG CTGGCGGTCG TCGACGCCGG AAGCATCTCG 
GCCGGCAGCA GGAAGCTCAA CGCGCCATTG CCCAGCGTCA GCCGTAAGGT GGCGGAACTT
GAACGACATC TTGGGGCGAA CCTCATCGTC CGCACCAGCC GCAATCTTCA GCTCACCGAC
GCCGGGCGTG ACTATGTCGA CGCCGCACGA AAGATCATGG CGGATCTTGA GGAGGCCGAG
CGAAGGGCGT CCGGGGAATA CCAAACGCCC AGAGGCGTGC TGACGATCAC GATGCCGATC
GAATACGGCA GCCGCTACGT CCTGCCCGTT GCGCTGAGCT TTATGGACAA ATATCCCGAG
GTATCGCTGA ACCTTCTGTC GCTCGACCGC ACGGTCGATC TCGTGTCCGA GCAGGTGGAT
ATCGCGATCC GTCTCGGCGA GCTCGCCGAC AGCGCCCTCC ATGCCGTCAA GATTGGTGAA
TTCCGCCTAC TGACCTGCGC GAGCCCCGCC TATCTCCAGC GGCATGGCAC ACCCGAGCGT
CCCGGCGATC TCATCGATCG AGACGGGATC ATCTTCAACA AGCGAACATT CTTCTGGACG
TTTGATGTCG ACGGCACGCC GATGGAGGCG GTGCCCCGCA ACCGGCTGGA GGTGAATACC
GCGGCGAACT GTGTTGCGGC GGCCGTCGGC GGGGCGGGGA TTGCGCGGCT ATTCGACTAT
CAGGTTCCTG ACGAGCTGGC GTCCGGCACG CTCGTTCCCA TCCTCAGCGA TTTCGACGGC
CCACCCAAAC CCATTCATAT CGCCTACGCG CGCCAGGGGC TTCTCGCGTT GAAGGTACGG
GCTTTCGTCG ACTGGGCATT GCCACGACTG CGGAAAGTCA GCAAAAATAA TCGAACATTA
TCTGAATGA
 
Protein sequence
MDRLEAMRIL LAVVDAGSIS AGSRKLNAPL PSVSRKVAEL ERHLGANLIV RTSRNLQLTD 
AGRDYVDAAR KIMADLEEAE RRASGEYQTP RGVLTITMPI EYGSRYVLPV ALSFMDKYPE
VSLNLLSLDR TVDLVSEQVD IAIRLGELAD SALHAVKIGE FRLLTCASPA YLQRHGTPER
PGDLIDRDGI IFNKRTFFWT FDVDGTPMEA VPRNRLEVNT AANCVAAAVG GAGIARLFDY
QVPDELASGT LVPILSDFDG PPKPIHIAYA RQGLLALKVR AFVDWALPRL RKVSKNNRTL
SE