Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1975 |
Symbol | |
ID | 8013013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1975901 |
End bp | 1976809 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644824562 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002975794 |
Protein GI | 241204698 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.718981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0815311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGTC TCGAAGCAAT GCGCATATTG CTGGCGGTCG TCGACGCCGG AAGCATCTCG GCCGGCAGCA GGAAGCTCAA CGCGCCATTG CCCAGCGTCA GCCGTAAGGT GGCGGAACTT GAACGACATC TTGGGGCGAA CCTCATCGTC CGCACCAGCC GCAATCTTCA GCTCACCGAC GCCGGGCGTG ACTATGTCGA CGCCGCACGA AAGATCATGG CGGATCTTGA GGAGGCCGAG CGAAGGGCGT CCGGGGAATA CCAAACGCCC AGAGGCGTGC TGACGATCAC GATGCCGATC GAATACGGCA GCCGCTACGT CCTGCCCGTT GCGCTGAGCT TTATGGACAA ATATCCCGAG GTATCGCTGA ACCTTCTGTC GCTCGACCGC ACGGTCGATC TCGTGTCCGA GCAGGTGGAT ATCGCGATCC GTCTCGGCGA GCTCGCCGAC AGCGCCCTCC ATGCCGTCAA GATTGGTGAA TTCCGCCTAC TGACCTGCGC GAGCCCCGCC TATCTCCAGC GGCATGGCAC ACCCGAGCGT CCCGGCGATC TCATCGATCG AGACGGGATC ATCTTCAACA AGCGAACATT CTTCTGGACG TTTGATGTCG ACGGCACGCC GATGGAGGCG GTGCCCCGCA ACCGGCTGGA GGTGAATACC GCGGCGAACT GTGTTGCGGC GGCCGTCGGC GGGGCGGGGA TTGCGCGGCT ATTCGACTAT CAGGTTCCTG ACGAGCTGGC GTCCGGCACG CTCGTTCCCA TCCTCAGCGA TTTCGACGGC CCACCCAAAC CCATTCATAT CGCCTACGCG CGCCAGGGGC TTCTCGCGTT GAAGGTACGG GCTTTCGTCG ACTGGGCATT GCCACGACTG CGGAAAGTCA GCAAAAATAA TCGAACATTA TCTGAATGA
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Protein sequence | MDRLEAMRIL LAVVDAGSIS AGSRKLNAPL PSVSRKVAEL ERHLGANLIV RTSRNLQLTD AGRDYVDAAR KIMADLEEAE RRASGEYQTP RGVLTITMPI EYGSRYVLPV ALSFMDKYPE VSLNLLSLDR TVDLVSEQVD IAIRLGELAD SALHAVKIGE FRLLTCASPA YLQRHGTPER PGDLIDRDGI IFNKRTFFWT FDVDGTPMEA VPRNRLEVNT AANCVAAAVG GAGIARLFDY QVPDELASGT LVPILSDFDG PPKPIHIAYA RQGLLALKVR AFVDWALPRL RKVSKNNRTL SE
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