Gene Rleg_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1963 
Symbol 
ID8013002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1956375 
End bp1957337 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content60% 
IMG OID644824552 
Productsugar ABC transporter substrate-binding protein 
Protein accessionYP_002975784 
Protein GI241204688 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC TGAAACGCAA TGCAGCCTTG TTTTTCGCCG GGTTGATGCT GAGCGCGGCG 
CCGATTGCCG TATCGCATGC TGCCGACAAG CCGACACTTG CATTTGTCGT CAATGGCGCA
TCCGACTTCT GGAAAGCCGC AGAGGCGGGC GTGAAGAAGG CGCAGGGCGA GATGCCAGAC
TACCAGATGG AGCTGAAGTA TCCTGAGCAG GCATCGGTCG CCGTTCAGCA ACGGCTTATG
GAAGACTTGG TCAGTGCCGG CGTCAAGGGG GTGATGGTCT CCGCGGTCGA TCCCAAGACC
CAGACGGACG GCTTGAACAA GATCGGCTCG CAGACTGCTC TCTTCACGAC CGATAGTGAC
GCGCCGCAGA CCAACCGCGT CGCCTATATC GGCTCGTCTA ATATCGATGC CGGCATGCAG
GCCGCCGAGA TCGCCAAAAA GGCGATGCCT GACGGCGGCA AATGCATCGG CTTCGTCGGC
CTGCTCGGCG CCGACAATGC CAAGGAACGC ATCCAGGGCA TGAAGGACGG CCTGAAGGGC
ACGAAGATCG AGCTGACGGA TGTCCGCGGT GACGATATCG ACCAGACGCG CGCAAAGAAG
AACGTCGAAG ACGCGCTGGT GGCCAGCCCG GACGTCACCT GCATGGTCGG CTTCTACTCC
TACAATACGC CGCGCATCTA TGAGGCGCTG CGCGACGCCG GCAAACTCGG CCAGATCACC
GTCGTCGGCT TTGATGACGA TCCGATCACG CTCGGCGGCG TCAAGGAGGG CACGATCGCA
GCGACCGTCG TGCAGCAGCC GTTCGAGTGG GCCTATCAGG GCATGAAGCT GATGGCGGCC
TATCTCAAGG GCGACAAATC AGGCGTTCCC AGCAACGGCT TGATCATCAT CCCGACGGTG
ATCATCGGCA AGGATGACGT TGACAAGTAT GCCGCCAGCC TGAAGGCTAT GTCTGGAAAA
TAA
 
Protein sequence
MKQLKRNAAL FFAGLMLSAA PIAVSHAADK PTLAFVVNGA SDFWKAAEAG VKKAQGEMPD 
YQMELKYPEQ ASVAVQQRLM EDLVSAGVKG VMVSAVDPKT QTDGLNKIGS QTALFTTDSD
APQTNRVAYI GSSNIDAGMQ AAEIAKKAMP DGGKCIGFVG LLGADNAKER IQGMKDGLKG
TKIELTDVRG DDIDQTRAKK NVEDALVASP DVTCMVGFYS YNTPRIYEAL RDAGKLGQIT
VVGFDDDPIT LGGVKEGTIA ATVVQQPFEW AYQGMKLMAA YLKGDKSGVP SNGLIIIPTV
IIGKDDVDKY AASLKAMSGK