| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1944 |
|---|
| Symbol | |
|---|
| ID | 8012984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 1933972 |
|---|
| End bp | 1935837 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644824533 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002975765 |
|---|
| Protein GI | 241204669 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.69459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAG CCGTTAGAAT AAACGATATT ATTCGTTCCT TTGGAATTGA TACGCATATC
GACTACACAG ATGGAAAATA TTCCAACGTC GGAGAAGTTG TTAAAGCACT CGACTATCTT
GGCCTTGATA CAGTTCGCGA TCACGCCCCC AACTCCGCTT CCGATCCCAA CGGCCAAACG
CATCTCGGCG ATGCTGCCGA GGCCGGCGTG CAATTCGTCT TCAGCGCCCA ACGGGAAGTC
GACCCCGCCA CTGTCGCCCA GCGGCTGCAT TCCTTCGTGC AGGCCCATCC AGGATCGGTC
GTCGGTATCG AAGGTCCGAA CGAAGTCAAC AACTGGCCAG TCAGCTATCA CGGCCTGAGC
GGCCAAGCCG CAGCGCTCGC CTATCAGAAG GACCTGTCTG CCGACGTCAA CGCCGATCCC
TTGCTGAAAA ATATCCCCGT TCTCGGCTTT ACCGGATATA CCGTGGCTTC CGCCTCCGAC
TACACGACGA TCCACACCTA TGCGAAGGAT GGCGACCAGC CATATTCATG GCTCTCCCGA
GAATCCGGCG TGCAGCGCGC TGCCGATCCG GGCAAGCCGC TGGCGATCAC CGAGACCGGC
TACCACACCT CGCTGACCGC CGACACCAAT GGCGGCTGGG AAGGCGTCAG TGAAGCGACG
CAGGCAAAGC TCCTGCTCAA TACGCTGATG GACGGCGCCG CACTCGGATC AAAACAGACG
TTCATCTACG AGCTGCTGGA CGCCTATTCC GATCCGCAGG GCACCAATCA GGAAAAGCAT
TTCGGCCTTT TTCATCTCGA CTATTCGGCC AAGCCGGCTG CGACGGCGAT CCACAATCTG
ACCGAAATCC TTGCGGATGA CGGCGCCGCG AAGGCAAGCT TCAGCGCGGG GACCCTCAAT
TATTCGATCG ACGGCCTGCC GTCCTCGGCC CGGAGCCTGC TGACGGAAAA ATCGGACGGA
AGCTACCAGA TCATCGTCTG GAACGAGCCC GATATCTGGA GCCAGTCCTC CGACACGGTT
ATTCAGGCCA CGACAACAGC CGTCAAAGTC AATCTCGGGG CCTCGTTTGG CTCCGTTAAG
GTCTTCGACC CGGTGACAGG AACGACGGCG ATCAAAAGCC TCAGCAACGT GTCGTCGCTG
CCGCTCGATG TCGTCGACCA TCCCTTGATC ATCGAGGTAG CAGGCACCGG CGCCAGCACA
CCGCCGCCGG CCACCAACCA TCTCTATGGC GGCACCGGTA ACGACACCTT CACCGTGACC
AATGCAAATC AAATCGTCGA CGAAAGCCGG GGCGGTGGAA CAGATACCGT CAAGGCTTCG
ATCTCCTTCA GCCTGGCCGA TCAGAAGCAT ACGGTCGGAA CGATCGAAAA CCTCACTTTG
ACCGGGACGG GCAATCTCAG CGCGACGGGC AACAATACGG CCAACATTCT CACCGGCAAC
GACGGAAACA ATTCCCTCAA CGGCGGGAAA GGAAACGACC GATTGATCGG CGGGCTCGGA
AACGACAAGC TGATCGGCAA GGCCGGTGCT GACGTTCTCA CCGGCGGCGG CGGCAGCGAT
TCCTTCGTCT TCGATGTGAA GCCCGACAAT ACCAGCGTCG ACAAGATCCG GGATTTTTCC
TCCGCGGCGG GCGACAAGCT GATGCTCGAT CATTCGATTT TCGCCGAGCT TAGCCTATCC
GGATTTTCGG ATGAGAATTT CGTTTTGGGA AGGAAAGCGC TCGAGGCTGA TGACAAGCTG
ATCTACGATC AGGCGAGCGG CATTCTATCC TATGACGCGG ATGGAAGCGC GGCGGGCGCG
GCCATCCATG TTACGGATCT CGATAATTCC GCAGCACTTC ACTTCAAAGA CTTCCTGCTT
GTCTGA
|
|---|
| Protein sequence | MAQAVRINDI IRSFGIDTHI DYTDGKYSNV GEVVKALDYL GLDTVRDHAP NSASDPNGQT
HLGDAAEAGV QFVFSAQREV DPATVAQRLH SFVQAHPGSV VGIEGPNEVN NWPVSYHGLS
GQAAALAYQK DLSADVNADP LLKNIPVLGF TGYTVASASD YTTIHTYAKD GDQPYSWLSR
ESGVQRAADP GKPLAITETG YHTSLTADTN GGWEGVSEAT QAKLLLNTLM DGAALGSKQT
FIYELLDAYS DPQGTNQEKH FGLFHLDYSA KPAATAIHNL TEILADDGAA KASFSAGTLN
YSIDGLPSSA RSLLTEKSDG SYQIIVWNEP DIWSQSSDTV IQATTTAVKV NLGASFGSVK
VFDPVTGTTA IKSLSNVSSL PLDVVDHPLI IEVAGTGAST PPPATNHLYG GTGNDTFTVT
NANQIVDESR GGGTDTVKAS ISFSLADQKH TVGTIENLTL TGTGNLSATG NNTANILTGN
DGNNSLNGGK GNDRLIGGLG NDKLIGKAGA DVLTGGGGSD SFVFDVKPDN TSVDKIRDFS
SAAGDKLMLD HSIFAELSLS GFSDENFVLG RKALEADDKL IYDQASGILS YDADGSAAGA
AIHVTDLDNS AALHFKDFLL V
|
|---|
| |