| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1914 |
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| Symbol | |
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| ID | 8012960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1902417 |
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| End bp | 1905917 |
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| Gene Length | 3501 bp |
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| Protein Length | 1166 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644824503 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_002975735 |
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| Protein GI | 241204639 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.621253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCTG GTTTCGATGC GAAGAAGCTT GCGGCCATTG CCGAGCCGCT GACGATCGGC
AATGTGCCGG CAGGTCTTGA AACGCTGCTG CTCGCCGAGC TCGCCCGAAC GGGAGAGCCG
GTCGCCTATG TCATGTCCGA CGGCCACCGC ATGGCCGATC TGGAGCAAAT GCTGAGCTTC
GTCGCCCCCG ACATTCCGGT TCTCACCCTG CCGGCCTGGG ACTGTCTGCC CTATGACCGC
GTCTCGCCGA GCGCCGACAC CTCGGCCCGC CGGCTGGCTG CGCTCGGTGG CCTCATCGCC
CATCGCAAGA AGCCGCATGC GGCAATCGTG CTCGTCACCG CCAATGCCAT GCTGCAGAAG
GTGGCGCCGC AGGATGTCAT CGAAAGCCTG AGCTTTTCGG CCCGTCCCGG CAACCAGCTG
CGCATGGACG ATCTCGCCGG CCGCCTGGAG CGCAATGGCT TCGAGCGGGT CGCCACCGTT
CGCGAAGTCG GCGAATATGC GGTGCGCGGC GGCATTCTCG ATGTCTTCGT GCCGGGTTCC
GAAGAGCCGG TCCGCCTCGA TTTCTTCGGC GATACGCTGG AGAGCATCCG CTCCTTCGAT
CCGGCCAGCC AGCGCACGAT CGGGCAGGTG CGTGCCCTCG ATCTCAATCC GATGAGCGAG
GTGACGCTGA CGCCCGATAC GATCAGCCGT TTCCGCAAGA ATTACCTCTC CGCTTTCGGC
GCGACCACAC GCGACGACGC GCTCTATCTT GCCGTCTCCG AAGGCCGCCG TTACCCCGGC
ATGGAGCACT GGCTGCCGCT CTTCTACGAG AAGCTCGATA CCGTCTTCGA TTATTTGAGC
GGCTTCCGGA TCGTCATCGA CCATACGGTG CGTGAAGCAG CCGAAGAGCG CTCCAAGCTC
GTTTTCGATT ATTACGACGC CCGCCTGAAC TCCGGCCAGC CGTCCAAGGG GATGACGCAG
GGCACGCCTT ACAAGCCGGT GACGCCGGGC CAGCTCTATC TCGACAGCAA GCTTTTCGTC
AAAACCCTCG ATGCGCTCGG CGCGATCCGC ATCAGCCCCT TCAACGAGCA TGAGGGCGAG
GCGCGGCGGG TCGTCAATGT CGACGCCCGC CAGGGCCAGC GCTGGGCCCG CTCGAACGCC
GAAGGCGGCG GCGATGCCGA ACGCATCAAC ATCTTCGACG TCGTCGTCAA GCATATCGCC
GACCGCCGCG CCGCCGGCGC GAAAGTGCTC GTCACCGCCT GGACCGAAGG CTCGCTGGAA
CGCCTGCTGC AGGTGCTGAA CGAGCACGGC CTCGAAAAGG TCAAGCCGAT CGAGGCGCTG
AAGGATGTCG GCTCGCTGGC GAGAGGCGAG GCGGCCGCTG CCGTGCTCAG CCTCGAAGCC
GGCTTCGAGG CCGGCGATCT CGTCGTCATC GGCGAGCAGG ATATCCTCGG CGACCGTATG
GTGCGCCGCT CCAAGCGCCG CAAGCGCGCC GCCGATTTCA TTTCGGAGGT CGCGGGCCTC
GACGAGGGCT CGATCGTCGT CCACGCCGAA CACGGCATCG GCCGCTTCAT CGGGCTGAGG
ACCATCGAGG CCGCAGGCGC GCCGCATGCC TGCCTCGAAC TGCAATATGC CGACGAGGCC
AAGCTCTTCC TGCCGGTCGA AAACATCGAT CTTCTCTCGC GCTACGGCGG CGAGGGCACC
GAAGCCCAGC TCGACAAGCT CGGTGGCGGC GCCTGGCAGA TGCGCAAGGC CAAGCTCAAG
AAGCGCCTGC TCGACATGGC CGATGCGCTG ATCCGCATCG CCGCCGAGCG CCTGACGCGC
CACGCGCCGA TGCTGACGAC GCCGGAAGGC CTTTACGACG AATTCGCTGC CCGCTTCCCC
TATGACGAGA CCGAGGACCA GGAAAACGCC ATCGAAGCCG TGCGCTCCGA TCTCGGTGCC
GGCCGGCCGA TGGATCGCCT CGTCTGTGGC GACGTCGGCT TCGGCAAGAC CGAAGTGGCG
CTGCGCGCTG CCTTCGTCGC GGCGATGAAC GGCGCCCAGG TCGCCGTCGT CGTGCCGACG
ACACTGCTTT CCCGCCAGCA TTTCAAGACC TTCTCCGACC GTTTCCGTGG TCTGCCGGTG
CGCATCCAGC AGGCCTCGCG CCTCGTCGGC GCCAAGGAAC TGGCGCTGAC CAAGAAGGAA
GTGGCGGAAG GCAAGACCGA TATCGTCGTC GGCACCCATG CGCTGCTCGG CGCCGGCATC
AAATTCGCCA ATCTCGGTCT GCTCGTCATC GACGAGGAAC AGCATTTCGG CGTCAAGCAC
AAGGAGAGGC TGAAGGAGCT GAAAAGCGAC GTGCACGTGC TGACGCTGTC GGCAACGCCG
ATCCCGCGCA CCCTGCAGCT CGCCATGACC GGTGTGCGCG AATTGTCGCT GATCACCACC
CCGCCGGTCG ACCGCATGGC GGTGCGCACC TTCATTTCGC CTTTTGACAG CCTGGTCATC
CGCGAGACGC TGATGCGCGA GCATTATCGC GGCGGCCAAA GCTTCTATGT CTGCCCAAGG
CTTGCCGATC TCGAGGACGT GCATGCCTTC CTGCAGTCGG ATTTGCCGGA GCTGAAGGTC
GCCGTCGCCC ATGGCCAGAT GCCGGCCGGC GAACTCGAAG ACATCATGAA CGCTTTCTAC
GAAGGCCGTT ACGACGTGCT GTTGTCGACC ACCATCGTCG AATCCGGCCT CGACGTACCC
ACCGCCAATA CGCTGATCGT CCACCGCGCC GACATGTTCG GCCTTGCCCA GCTCTATCAG
CTGCGCGGCC GCGTCGGCCG CTCGAAGGTG CGCGCTTTTG CGCTCTTCAC CCTGCCTGTT
AATAAGGTGC TGACGGCCAC CGCCGAACGC CGCCTCAAGG TGCTGCAGTC GCTGGATACG
CTCGGTGCCG GCTTCCAGTT GGCAAGCCAC GATCTCGATA TCCGCGGCGC CGGCAATCTG
CTCGGCGAGG AGCAGTCCGG CCATATCAAG GAGGTCGGCT TCGAGCTTTA CCAGCAGATG
CTGGAAGAGG CGGTCGCCGA GGTCAAGGGT GTCGACGAGA TCCACGATAC CGGCTGGTCA
CCGCAGATCT CCGTCGGCAC GACGGTGATG ATCCCGGAAG GCTACGTGCC TGATCTGCAC
CTGCGCATGG CGCTCTACCG CCGTCTCGGC GAAATCACCG AACTCAAGGA GATCGACGGC
TTCGGCGCCG AGATGATCGA CCGCTTCGGC CCGATGCCGA TCGAAGTCCA GCACCTGCTG
AAGATCGTCT ACATCAAGTC GCTCTGCCGC ACCGCCAATG TCGAAAAGCT CGATGCCGGC
CCGAAGGGCG TCGTCGTGCA GTTCCGCAAC AAGGAATTCC CCAACCCGGC AAACCTCGTC
GGTTATATCG GCAAGCAGGG CACGATGGCG AAGATCCGCC CCGACCACAG CCTGTTCCTG
ACCCGCGACC TGCCGACGCC GGAAAAACGC CTGCAGGGCG CTGCCGTCAT CATGACGCAG
CTGGCTGAAT TTGCGAAATA G
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| Protein sequence | MIPGFDAKKL AAIAEPLTIG NVPAGLETLL LAELARTGEP VAYVMSDGHR MADLEQMLSF
VAPDIPVLTL PAWDCLPYDR VSPSADTSAR RLAALGGLIA HRKKPHAAIV LVTANAMLQK
VAPQDVIESL SFSARPGNQL RMDDLAGRLE RNGFERVATV REVGEYAVRG GILDVFVPGS
EEPVRLDFFG DTLESIRSFD PASQRTIGQV RALDLNPMSE VTLTPDTISR FRKNYLSAFG
ATTRDDALYL AVSEGRRYPG MEHWLPLFYE KLDTVFDYLS GFRIVIDHTV REAAEERSKL
VFDYYDARLN SGQPSKGMTQ GTPYKPVTPG QLYLDSKLFV KTLDALGAIR ISPFNEHEGE
ARRVVNVDAR QGQRWARSNA EGGGDAERIN IFDVVVKHIA DRRAAGAKVL VTAWTEGSLE
RLLQVLNEHG LEKVKPIEAL KDVGSLARGE AAAAVLSLEA GFEAGDLVVI GEQDILGDRM
VRRSKRRKRA ADFISEVAGL DEGSIVVHAE HGIGRFIGLR TIEAAGAPHA CLELQYADEA
KLFLPVENID LLSRYGGEGT EAQLDKLGGG AWQMRKAKLK KRLLDMADAL IRIAAERLTR
HAPMLTTPEG LYDEFAARFP YDETEDQENA IEAVRSDLGA GRPMDRLVCG DVGFGKTEVA
LRAAFVAAMN GAQVAVVVPT TLLSRQHFKT FSDRFRGLPV RIQQASRLVG AKELALTKKE
VAEGKTDIVV GTHALLGAGI KFANLGLLVI DEEQHFGVKH KERLKELKSD VHVLTLSATP
IPRTLQLAMT GVRELSLITT PPVDRMAVRT FISPFDSLVI RETLMREHYR GGQSFYVCPR
LADLEDVHAF LQSDLPELKV AVAHGQMPAG ELEDIMNAFY EGRYDVLLST TIVESGLDVP
TANTLIVHRA DMFGLAQLYQ LRGRVGRSKV RAFALFTLPV NKVLTATAER RLKVLQSLDT
LGAGFQLASH DLDIRGAGNL LGEEQSGHIK EVGFELYQQM LEEAVAEVKG VDEIHDTGWS
PQISVGTTVM IPEGYVPDLH LRMALYRRLG EITELKEIDG FGAEMIDRFG PMPIEVQHLL
KIVYIKSLCR TANVEKLDAG PKGVVVQFRN KEFPNPANLV GYIGKQGTMA KIRPDHSLFL
TRDLPTPEKR LQGAAVIMTQ LAEFAK
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