Gene Rleg_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1907 
Symbol 
ID8012955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1893760 
End bp1894728 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content58% 
IMG OID644824496 
Productinner membrane ABC transporter permease protein YjfF 
Protein accessionYP_002975728 
Protein GI241204632 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0669579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.893189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCA AATACCTGCC GCTGCTTGCG ACCATCGTCA TCTTCGTGCT CGCCTATGCC 
GGCTGCGCGC TGCAATATCC GAACATTCTG TCGACGCGCG TCATCGGCAA TCTTTTGACC
GACAACGCCT TTCTCGGCAT TGCCGCCGTT GGCATGACTT TCGTCATCAT TTCGGGCGGC
ATCGATCTGT CGATCGGCTC GGTCATCGCC TTTACCGGCG TCTTCCTCGC GGTGATCCTG
CAGAACACCT CGATCCATCC GCTGCTCGCT TTCGCGATCG TGCTCGTCAT CACCACTGTC
TTTGGTGGTA TCATGGGCGC GATCATCCAT TATCTCGAAA TGCCGGCCTT CATCGTCACG
CTTGCCGGCA TGTTCCTGGC ACGCGGCATG GCCTTCGTGC TCTCGATCGA CAGCATCCCG
ATCGATCATG AATATTATTC GACGCTGACG AGCCTCTACT ATCGTCTGCC CGGCGGCGGG
CGGCTGACGC TGATCGGCGG CATCATGCTT CTGGTCTTTG CCGTCGGCAT CTTCATCGCC
CAGCGCACCC GCTTCGGCAC CAATGTCTAT GCACTCGGCG GCGGTCCGCA GACGGCGCGG
CTGATGGGCG TGCCGGTCGG CCGCACGACA ATCCAGATCT ATGCGCTGTC GGGCTTTCTG
GCGGGCCTAT CCGGGATCGT TTTTTCGCTG TACACCTCTG CCGGATATTC TCTTGCAGCA
GTCGGCGTCG AACTCGATGC CATCGCGGCG GTGGTCATTG GGGGGACGCT GCTGACCGGA
GGAGCGGGAT TCGTGGCGGG AACCTTGATC GGGATACTGA TCCAGGGGCT CATTCAGACC
TACATCACCT TCGATGGTAC GCTGTCGAGC TGGTGGACCA AGATTCTGAT TGGTCTTCTG
CTGTTTGCAT TCATCCTGAT GCAGAAAGCC ATCCTGTTCA TTTCCAGTCT GAACAAGAGG
TACGCCTGA
 
Protein sequence
MNSKYLPLLA TIVIFVLAYA GCALQYPNIL STRVIGNLLT DNAFLGIAAV GMTFVIISGG 
IDLSIGSVIA FTGVFLAVIL QNTSIHPLLA FAIVLVITTV FGGIMGAIIH YLEMPAFIVT
LAGMFLARGM AFVLSIDSIP IDHEYYSTLT SLYYRLPGGG RLTLIGGIML LVFAVGIFIA
QRTRFGTNVY ALGGGPQTAR LMGVPVGRTT IQIYALSGFL AGLSGIVFSL YTSAGYSLAA
VGVELDAIAA VVIGGTLLTG GAGFVAGTLI GILIQGLIQT YITFDGTLSS WWTKILIGLL
LFAFILMQKA ILFISSLNKR YA