Gene Rleg_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1906 
Symbol 
ID8012954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1892750 
End bp1893763 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content62% 
IMG OID644824495 
Productinner-membrane translocator 
Protein accessionYP_002975727 
Protein GI241204631 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.19389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.673153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTCCT CGCTGAAAGC GCTGGCATAT CGCTTGGCGC CGCAATTGAT TGCGCTCGTT 
GTCATTCTTC TGTTGAATTT CATAACGTCG CCGCAGTTTT TTAATGTCGT GGTTCAGAAT
GACCGCCTCT ATGGCAGCCT GATCGATGTG CTGAACCGCG GCGCGCCGGT GGCGCTGCTG
GCGATCGGCA TGACGCTGGT CATCGCCACC AAGGGCATCG ACCTGTCCGT CGGTGCAGTC
ATCGCCATCT GCGGCGCCGT CGCCGCATCG TCGATTGTCT CCGGAAATTC AGTTGCCTAC
ACCATTATCC TGACGCTTGC GATCGGGCTT GCCTGCGGCG TCTGGAACGG TTTCCTGGTG
GCGGTCCTCA ATATCCAGCC GATCATCGCG ACGCTAGTGC TGATGGTCGC CGGCCGCGGC
ATCGCCCAGC TGATCACCGA AGGCGCCATC CTGACCTTCA ACAATGACGG GCTCACCTTC
TTCGGCAGCG GTTCGCTGCT GCTCCTGCCG ATGCCTGTCG TCATCTGGCT TCTCGTCGGC
CTGCTCGTGA TCCTGCTCGT CCGCCGCACG GCGCTCGGCA TGCTGATCGA GGCCGTCGGC
ATCAATCGCC GCGCCAGCAC GCTCTCCGGC ATTCAAACGC CGGTGCTGCT GATGGCGGTC
TATATGCTGA GCGGGCTCTG CGCCTCGATC GCGGGCATCA TAGTCGCAGC CGACATCAAG
GGCGCCGATG CCAACAATGC CGGCCTATGG TTGGAACTCG ACGCCATCCT CGCCGTTGTC
GTCGGCGGCA ATTCGCTGCT CGGCGGCCGC TTCAGCATTC TCGGGTCGCT GATCGGCGCG
ATGATCATCC AGGCGGTGAA TACCGGCATC CTGTCCGCCG GCTTTCCACC TGAATTCAAC
CTGATCATCA AGGCCGTCAT CATTATCGTC ATCCTCGTCA TCCAGTCGCC GGCGGTCCAA
TCGCTCGCCA TCTTCGCCAG CCGCCGGCAG GGCGGTAGGG AGCAGCCGAA ATGA
 
Protein sequence
MRSSLKALAY RLAPQLIALV VILLLNFITS PQFFNVVVQN DRLYGSLIDV LNRGAPVALL 
AIGMTLVIAT KGIDLSVGAV IAICGAVAAS SIVSGNSVAY TIILTLAIGL ACGVWNGFLV
AVLNIQPIIA TLVLMVAGRG IAQLITEGAI LTFNNDGLTF FGSGSLLLLP MPVVIWLLVG
LLVILLVRRT ALGMLIEAVG INRRASTLSG IQTPVLLMAV YMLSGLCASI AGIIVAADIK
GADANNAGLW LELDAILAVV VGGNSLLGGR FSILGSLIGA MIIQAVNTGI LSAGFPPEFN
LIIKAVIIIV ILVIQSPAVQ SLAIFASRRQ GGREQPK