Gene Rleg_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1900 
Symbol 
ID8012949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1885202 
End bp1886770 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content64% 
IMG OID644824489 
ProductABC transporter related 
Protein accessionYP_002975721 
Protein GI241204625 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.948331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.18813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCCAT TGAATGTGCC GGATTCCGGC GCGTTATTAT CGGTCCAGAA GCTGACGAAG 
TTCTTCGGTG GCTTTGCAGC CTGCAATGAA ATCGATCTCG ATATCGCGCC GGGCGAAATT
CATGCGCTTC TCGGCGAAAA TGGTGCAGGC AAATCCACCC TGGTGAAGAT GCTGTTCGGC
GTTCTCGAGC CGACGGGCGG GCATATCCTC TGGCAGGGCC AGCCGGTCGC GATCGCGTCG
CCCGGTGAAG CCCGCAAGCT CGGCATCGGC ATGGTCTTCC AGCATTTTTC GCTGTTCGAG
GCGCTGACGG TTGCCGAAAA CATCGCGCTG TCGCTCGATG ACGCCATCCC GATCGACAAA
ATCGCCGAGG AGGCGAGGGC GCTGTCCATC GCCTACGGCC TGCCGCTCGA TCCGCATGCC
CATGTCGCCG ATCTCTCGGT CGGCGAGCGC CAGCGTATCG AGATCGTCCG TGCGCTGCTG
CAGAACCCGA AGCTCATCAT CCTCGACGAA CCGACCTCGG TGCTGACGCC GCAGGAAGCC
GACAGACTGT TCGAGACGCT GTTCAAACTG CGCGCCGAGG GGCGTTCGGT TCTTTATATC
AGCCACCGCC TGGAGGAAGT GCAGCGCATC TGCGATCGCG CCACAGTCCT GCGCCATGGC
CGCGTGACCG GCGCATGCGA TCCCAAACAC GAAACGCCGG CCTCGCTCGC CCGCATGATG
GTCGGCAGCG AAGTGGCGAC CGTGACGCAT CCGGAGCGCA GCGACAAGGG CGAGATCCAG
CTTGCCGTTG CCAACCTTTC CGTCGCCGCG CGCACCCCCT TCGCTATGCC GCTGCGCGAC
GTGTCGATGG CGGTCCGCTC CGGCGAAATC CTCGCCATAG CAGGTGTCGC GGGCAACGGC
CAAAGCGAGC TCTTCGACGC ATTGTCCGGC GAATATCCCG TTGTTTCGGC CGAGGCGATC
GTCATCCGCA AGAGGCCGGT CGGTAACCAG GGCATTACCG CCCGGCGTCT TCTCGGCGCC
GGCTTCGTGC CGGAGGAGCG CCATGGCCAT GCCGCCGTCT CTGCCATGAA ACTGTCGGAT
AATCTCGTCC TTGCCCGCAG CCAGTCGGAC CGCAAGGCGT TTCTGGGCCT GCTCGGTATC
ATTCGCCACG CTGCGGTGAA ATCCGCCGCA AGGCGCATTT CCGAGGCGAT GGATGTCCGC
AAGAGCAGTG ATGATCCGGC GGCCGGCTCC CTGTCAGGCG GCAACCTGCA GAAGTTTATC
GTCGGACGCG AGCTCGACCG TCAGCCGGCA GTCCTCGTCG TCAACCAGCC GACCTGGGGC
GTCGATGCCG GGGCTGCAAG CCGCATCCGT CAGGCGCTCG TCGATCTCGC AAGAGCTGGT
TCGGCCGTCG TCGTTATCAG CCAGGATCTC GACGAGATCT TCGAAGTGGC GACCGATATT
GCCGTCATCT GCGAAGGCCG TCTTTCCCGC CCGTTCCCGG CCGGCGAACT GACGCGGGAA
AGGATCGGAC TGCTGATGGG CGGACTGCAC GAGAGCAGCT CTCCCCCGGA GGCGCCCCAT
GCGCATTGA
 
Protein sequence
MSPLNVPDSG ALLSVQKLTK FFGGFAACNE IDLDIAPGEI HALLGENGAG KSTLVKMLFG 
VLEPTGGHIL WQGQPVAIAS PGEARKLGIG MVFQHFSLFE ALTVAENIAL SLDDAIPIDK
IAEEARALSI AYGLPLDPHA HVADLSVGER QRIEIVRALL QNPKLIILDE PTSVLTPQEA
DRLFETLFKL RAEGRSVLYI SHRLEEVQRI CDRATVLRHG RVTGACDPKH ETPASLARMM
VGSEVATVTH PERSDKGEIQ LAVANLSVAA RTPFAMPLRD VSMAVRSGEI LAIAGVAGNG
QSELFDALSG EYPVVSAEAI VIRKRPVGNQ GITARRLLGA GFVPEERHGH AAVSAMKLSD
NLVLARSQSD RKAFLGLLGI IRHAAVKSAA RRISEAMDVR KSSDDPAAGS LSGGNLQKFI
VGRELDRQPA VLVVNQPTWG VDAGAASRIR QALVDLARAG SAVVVISQDL DEIFEVATDI
AVICEGRLSR PFPAGELTRE RIGLLMGGLH ESSSPPEAPH AH