Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1900 |
Symbol | |
ID | 8012949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1885202 |
End bp | 1886770 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644824489 |
Product | ABC transporter related |
Protein accession | YP_002975721 |
Protein GI | 241204625 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.948331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.18813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCCAT TGAATGTGCC GGATTCCGGC GCGTTATTAT CGGTCCAGAA GCTGACGAAG TTCTTCGGTG GCTTTGCAGC CTGCAATGAA ATCGATCTCG ATATCGCGCC GGGCGAAATT CATGCGCTTC TCGGCGAAAA TGGTGCAGGC AAATCCACCC TGGTGAAGAT GCTGTTCGGC GTTCTCGAGC CGACGGGCGG GCATATCCTC TGGCAGGGCC AGCCGGTCGC GATCGCGTCG CCCGGTGAAG CCCGCAAGCT CGGCATCGGC ATGGTCTTCC AGCATTTTTC GCTGTTCGAG GCGCTGACGG TTGCCGAAAA CATCGCGCTG TCGCTCGATG ACGCCATCCC GATCGACAAA ATCGCCGAGG AGGCGAGGGC GCTGTCCATC GCCTACGGCC TGCCGCTCGA TCCGCATGCC CATGTCGCCG ATCTCTCGGT CGGCGAGCGC CAGCGTATCG AGATCGTCCG TGCGCTGCTG CAGAACCCGA AGCTCATCAT CCTCGACGAA CCGACCTCGG TGCTGACGCC GCAGGAAGCC GACAGACTGT TCGAGACGCT GTTCAAACTG CGCGCCGAGG GGCGTTCGGT TCTTTATATC AGCCACCGCC TGGAGGAAGT GCAGCGCATC TGCGATCGCG CCACAGTCCT GCGCCATGGC CGCGTGACCG GCGCATGCGA TCCCAAACAC GAAACGCCGG CCTCGCTCGC CCGCATGATG GTCGGCAGCG AAGTGGCGAC CGTGACGCAT CCGGAGCGCA GCGACAAGGG CGAGATCCAG CTTGCCGTTG CCAACCTTTC CGTCGCCGCG CGCACCCCCT TCGCTATGCC GCTGCGCGAC GTGTCGATGG CGGTCCGCTC CGGCGAAATC CTCGCCATAG CAGGTGTCGC GGGCAACGGC CAAAGCGAGC TCTTCGACGC ATTGTCCGGC GAATATCCCG TTGTTTCGGC CGAGGCGATC GTCATCCGCA AGAGGCCGGT CGGTAACCAG GGCATTACCG CCCGGCGTCT TCTCGGCGCC GGCTTCGTGC CGGAGGAGCG CCATGGCCAT GCCGCCGTCT CTGCCATGAA ACTGTCGGAT AATCTCGTCC TTGCCCGCAG CCAGTCGGAC CGCAAGGCGT TTCTGGGCCT GCTCGGTATC ATTCGCCACG CTGCGGTGAA ATCCGCCGCA AGGCGCATTT CCGAGGCGAT GGATGTCCGC AAGAGCAGTG ATGATCCGGC GGCCGGCTCC CTGTCAGGCG GCAACCTGCA GAAGTTTATC GTCGGACGCG AGCTCGACCG TCAGCCGGCA GTCCTCGTCG TCAACCAGCC GACCTGGGGC GTCGATGCCG GGGCTGCAAG CCGCATCCGT CAGGCGCTCG TCGATCTCGC AAGAGCTGGT TCGGCCGTCG TCGTTATCAG CCAGGATCTC GACGAGATCT TCGAAGTGGC GACCGATATT GCCGTCATCT GCGAAGGCCG TCTTTCCCGC CCGTTCCCGG CCGGCGAACT GACGCGGGAA AGGATCGGAC TGCTGATGGG CGGACTGCAC GAGAGCAGCT CTCCCCCGGA GGCGCCCCAT GCGCATTGA
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Protein sequence | MSPLNVPDSG ALLSVQKLTK FFGGFAACNE IDLDIAPGEI HALLGENGAG KSTLVKMLFG VLEPTGGHIL WQGQPVAIAS PGEARKLGIG MVFQHFSLFE ALTVAENIAL SLDDAIPIDK IAEEARALSI AYGLPLDPHA HVADLSVGER QRIEIVRALL QNPKLIILDE PTSVLTPQEA DRLFETLFKL RAEGRSVLYI SHRLEEVQRI CDRATVLRHG RVTGACDPKH ETPASLARMM VGSEVATVTH PERSDKGEIQ LAVANLSVAA RTPFAMPLRD VSMAVRSGEI LAIAGVAGNG QSELFDALSG EYPVVSAEAI VIRKRPVGNQ GITARRLLGA GFVPEERHGH AAVSAMKLSD NLVLARSQSD RKAFLGLLGI IRHAAVKSAA RRISEAMDVR KSSDDPAAGS LSGGNLQKFI VGRELDRQPA VLVVNQPTWG VDAGAASRIR QALVDLARAG SAVVVISQDL DEIFEVATDI AVICEGRLSR PFPAGELTRE RIGLLMGGLH ESSSPPEAPH AH
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