| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1892 |
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| Symbol | |
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| ID | 8012942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1877741 |
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| End bp | 1879033 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644824481 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002975713 |
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| Protein GI | 241204617 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.133123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA TCGTAAGCGG CAGCGAAACC GGAGCAAAGA CAGGCGCAGC GTCTGATCTC
GCCGCGGTCC TTGCTGCATC GGGCCGGCAG GGCAAGCGCA GCCGCTGGCG CGGACGCCTG
CTCATCCTGC TGATTCTCAT CGCTGCTGCA GCCGTCTCCG CTTATGTCTA TATGGGCCGT
GGGCAAAGCG AAGTGAGCTA TGCCACCCAG CCGGCAAAAC GCGGCGACCT GACGGTGCTC
GTCACCGCCA CCGGTTCCGT GCAGCCGACC GAGCAGGTGG ATATATCGAG CGAACTGTCA
GGCACAGTTC GCGACGTCAA CGTCGATTAC AACAGCACGG TCAAATCGGG CGAAGTGCTC
GCTCTCCTCG ATACCAACAA GCTCGAGGCC GATGTGAAGA GCTCGCGCGC CAAGCTCAAT
TCGGCCAAGG CGAACGTCAT CAAAGCCAAT GCCGATATGC AATCGGCAGG CACCTCGCTC
GAGCGGCTGA AGAGCCTGGT CAAGAGCAAC GTCTCCACCC AGCAGAGCCT CGACGACGCC
AGCTACAAAT ATGATTCCGC CGTCGCCGCC AAACAGATCA ATGAGGCCGA GGTTCTGGCC
TCGGAGGCCG ACCTGCAGCT TGCCGAAGTC AATCTCGCCA AGGCGAAGAT CATATCGCCG
ATCGACGGCG TCATCCTCAC CCGCTCCGTC AATCCTGGCG CCACGGTCGC AGCCTCGCTC
TCGGCGCCGA TCCTTTTCAC CATCGCCGGC GACCTGAAGA AGATGGAGCT GCAGGTTGAT
GTCGACGAGG CCGATGTCGG TCAGATCGCC GTCGGCCAAA AGGCGAAGTT CACCGTCGAC
GCCTATCCCG ATCGCAGCTT TCCCGCCGAG ATCGAGCAGA TCCGCTTCGC CTCCGAAGTG
GTCAACAATG TCGTGACCTA TAAGGCGGTC CTATCGGTCG ACAATGCCGA TTTGCTGCTG
CGCCCCGGCA TGACGGCGAC GGCCGATGTC ACCGTCGAGG CCGTCAAGGA CACGCTGATG
GTGCCGAATG CGGCGCTGCG CTACGCTCCG GCGCAGGCGG AAAGGCGCGG CCGCGGTATT
TTCGGCATCT TCGGCCCGCC GCGCCAGCGC AACAACAATG CCGGTCCGGC GCTGAAGGGC
GCTGAGCGCC GTGTCTGGCT GCTGCGCAAC GGTCGCCCGG CGCCTGTTGT CATCCAGGTC
GGCTCATCTG ACGGCCAGTT CACCCAGGTC GTCTCCGGCG ACATCAAGGA AAACGACGCA
CTGGTGACCG ACGCCACGAC GCGTGCGAAC TAG
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| Protein sequence | MNKIVSGSET GAKTGAASDL AAVLAASGRQ GKRSRWRGRL LILLILIAAA AVSAYVYMGR
GQSEVSYATQ PAKRGDLTVL VTATGSVQPT EQVDISSELS GTVRDVNVDY NSTVKSGEVL
ALLDTNKLEA DVKSSRAKLN SAKANVIKAN ADMQSAGTSL ERLKSLVKSN VSTQQSLDDA
SYKYDSAVAA KQINEAEVLA SEADLQLAEV NLAKAKIISP IDGVILTRSV NPGATVAASL
SAPILFTIAG DLKKMELQVD VDEADVGQIA VGQKAKFTVD AYPDRSFPAE IEQIRFASEV
VNNVVTYKAV LSVDNADLLL RPGMTATADV TVEAVKDTLM VPNAALRYAP AQAERRGRGI
FGIFGPPRQR NNNAGPALKG AERRVWLLRN GRPAPVVIQV GSSDGQFTQV VSGDIKENDA
LVTDATTRAN
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