Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1888 |
Symbol | |
ID | 8012938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1875234 |
End bp | 1876313 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644824477 |
Product | ABC transporter related |
Protein accession | YP_002975709 |
Protein GI | 241204613 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.2512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGGC TCGAGCTCAG GAACATCGTC AAGAATTTCG GCGCCGTCGA GGTCATTCGC GATGTCTCGC TTCATGTCAA TGACGGCGAG TTCGTCGCTT TCGTCGGCCC TTCCGGTTGC GGGAAATCGA CGCTCTTGCG CCTGATTGCC GGCCTCGATA AGCCGACTGA CGGCAGCATC GCCATCGACG GCAAGGATGT TACCGCTATC AGCGCTGCCG ATCGCGGCCT GGCCATGGTC TTCCAGTCCT ATGCGCTCTA TCCGCATATG AGTGTCAGGG AGAACCTCGC CTTTGGTCTC GAGAACACCA AGGTGGCGAA AGCCGAGATC GAAGCGCGCA TTACCGACGC CGCGCGCATG CTGGAGATCG AGCCTTTCCT GCAACGCCGT CCGGGCCAAC TCTCCGGCGG CCAGCGCCAG CGCGTCGCCA TCGGCCGCGC CATCGTGCGG CGGCCGGATG CCTTTCTGCT CGACGAGCCG CTATCCAATC TCGACGCCGA ACTCAGGGTC AGCATGCGGG CCGAACTGGC GGCCCTTCAC GCCCGCCTGA AGGCGACGAT GATCTACGTC ACCCACGATC AGGTCGAGGC AATGACACTG GCCGACCGCA TCGTCGTGCT GAGAGGCGGC AGGATCGAGC AGGTGGGAAC ACCGCTGGAA CTCTACAACA AGCCGGCCAA CCGCTTCGTC GCCGGCTTCA TCGGCGCGCC GCACATGAAT TTCCTCGAAG GTGCGATTGT CGGTCACGAG GGCGGTTTCG CTGAAGTCGA AACCGTCGGC GGCCATCGCC TTTCCGTCAT TGCCAAGGAG GCCCCCCCGG CGGGCGAAAG GGTCAGCATC GGCATTCGGC CGCAGCATAT CACCCTCGCC GAAGCGGGCT CAGCGGGCAG ACTGGATACA AGCGTTACCC TTGTCGAGGA ATTGGGCTCG GAGACTGTCG TCCACGCCGA CGCAGGCGGG AAGAAGCTGA TTGCGGTTTT TGCCGGCCAG CAGCGGATGA AATCGGGTGA CAGCCTGCCG CTGCATCTCG ACCCCGATGT GCTGCACCTC TTCGGCGAGG ACGGCAGGCG CTTGTCCTAA
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Protein sequence | MSGLELRNIV KNFGAVEVIR DVSLHVNDGE FVAFVGPSGC GKSTLLRLIA GLDKPTDGSI AIDGKDVTAI SAADRGLAMV FQSYALYPHM SVRENLAFGL ENTKVAKAEI EARITDAARM LEIEPFLQRR PGQLSGGQRQ RVAIGRAIVR RPDAFLLDEP LSNLDAELRV SMRAELAALH ARLKATMIYV THDQVEAMTL ADRIVVLRGG RIEQVGTPLE LYNKPANRFV AGFIGAPHMN FLEGAIVGHE GGFAEVETVG GHRLSVIAKE APPAGERVSI GIRPQHITLA EAGSAGRLDT SVTLVEELGS ETVVHADAGG KKLIAVFAGQ QRMKSGDSLP LHLDPDVLHL FGEDGRRLS
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