Gene Rleg_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1882 
Symbol 
ID8015612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1867198 
End bp1867941 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID644824471 
ProductABC transporter related 
Protein accessionYP_002975703 
Protein GI241204607 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.376735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATG TGCGTGACCT CGATGTCGTC TTTGCCTCTG GCAAGACTAG CAACCATGTC 
GTCAGGGGCA TCAGTTTTCA GGTCAACCAG GGGGAGACCC TTGGCATTGT CGGTGAATCC
GGATGCGGCA AATCGACGGT GCTGCGTTGC CTGGCCGGCA TGGAGGCCGG TTGGACCGGT
CACATCGAGC TTGGCGGCAA ACCGATCGGC AAGAAGCGCT CCCGCGAGGA GCTGAAATTT
GCCCAGATGG TGTTTCAGGA CCCTTACGGA TCCCTGCATC CGCGCCATCG TATCGGCACC
GCCCTGGCGG AACCGCTGCG CGCGATGGGC CATTCCGATA TCTGGTCGAA GGTCGAAAGG
GCTTTGATCC AGGTCGGTTT GCCGGCGAGC TTCGCAAACC GTTTTCCGCA CGAACTTTCC
GGCGGCCAGA GGCAGAGGGT GGCAATCGCC CGGGCCCTGA TCCTGTCGCC GCCCATCCTG
TTGCTCGACG AGCCGACATC GGCGCTCGAC GTCTCGGTCC AGGCCGAAAT CCTGAACCTG
CTGGCCGATC AGCGCGAGGA AAAGGGCCTG ACCTATCTGC TTGTCAGCCA CGACCTCGCA
GTCATCGCCC ATATGTGCGA CCGGGTGCTG ATCATGAAGA ACGGTTGCTT TGTGGACGAG
CTCACCAAAG CGGATCTGCA GGCCGGCACC ACGCATGATG CCTATGCGCG AGAACTGTTT
GAGGCGAGTT TTATCGAGGC TTGA
 
Protein sequence
MINVRDLDVV FASGKTSNHV VRGISFQVNQ GETLGIVGES GCGKSTVLRC LAGMEAGWTG 
HIELGGKPIG KKRSREELKF AQMVFQDPYG SLHPRHRIGT ALAEPLRAMG HSDIWSKVER
ALIQVGLPAS FANRFPHELS GGQRQRVAIA RALILSPPIL LLDEPTSALD VSVQAEILNL
LADQREEKGL TYLLVSHDLA VIAHMCDRVL IMKNGCFVDE LTKADLQAGT THDAYARELF
EASFIEA