| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1879 |
|---|
| Symbol | |
|---|
| ID | 8012931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1864442 |
|---|
| End bp | 1865470 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644824468 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002975700 |
|---|
| Protein GI | 241204604 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.240236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.205631 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAC TCTCCGTAGC CGAATTTGGC CGACGCCTGG CGCATTTGCT GGTCAGCCTG
TTCATCCTCT TATGTGTGAC CTTCGTGATC GGCCGTATCC TGCCCACCGA TCCGGTCGGC
GCGATTGTCG GCGAGCTCGC GGATCCCGCC GCCTATGCGG CGATGCGGGC GCGTCTCGGG
CTCGATCTGC CGATCTACCA GCAGTTTTTC CTCTATCTGA ACGGGCTGGC CCACGGTGAT
TTCGGCACCG CCGTCCTCAC CGGCAATCCC GTCTCTTCGG ATCTCGCTCA AGCCTTTCCT
GCGACATTCG AACTGGCGAC GCTGGCGGTG ATCATTTCGA CCTTCGTCGG TGTCCCGCTC
GGGTTGGTCG CAGCACTGTT TCGAGATAGC TTCATCGACA AGACGGCCCG CGTGGTCGCG
CTCGTCGGTC ATTCGATCCC GGTTTTCTGG TTCGGCATCG TCGGGCTCGT CATCTTCTAT
GCCGGCCTCA ACTGGGTCGG CGGGCCGGGC AGGATCGATG TGTTTTACGA GGGTCTCGTC
ACGCCGCGCA CCGGGCTGTT GTTGATCGAC AGCCTGCTGC AGGGCGAGAC GGAAATCTTC
TGGAATGCAC TCGGCCATAT CATTCTTCCG GCTGTCATTC TCGCCTACGC GGCGATGGCC
TACATCACCC GCATGACACG CAGCTTCACC CTGGAGCAGT TGAGCCAGGA TTATGTCATC
GCGGCCCGAG CCAAGGGTGT GAGCCCGCTC GGCACGATCT GGCACCACGT CCTGCCGAAC
ATTGCGGTGC AGCTGATCAC CATCCTGGCC ATTTCCTATG GCGGTCTGCT CGAAGGCGCT
GTCGTGACCG AGATCGTTTT CTCCTGGCCG GGCATTGGCC AGTACATGAC CAACGCGCTG
ATGATCGGCG ACATGAACGC CATCGTCGCC GGCACCATCA TTGTGGGATT CATTTTCATG
TTGTTGAACT TCCTGGCCGA CGTCGCTTAC GCCGTCTTTG ATCCGCGCAT GCGGGAGGCG
GCCCGATGA
|
|---|
| Protein sequence | MKELSVAEFG RRLAHLLVSL FILLCVTFVI GRILPTDPVG AIVGELADPA AYAAMRARLG
LDLPIYQQFF LYLNGLAHGD FGTAVLTGNP VSSDLAQAFP ATFELATLAV IISTFVGVPL
GLVAALFRDS FIDKTARVVA LVGHSIPVFW FGIVGLVIFY AGLNWVGGPG RIDVFYEGLV
TPRTGLLLID SLLQGETEIF WNALGHIILP AVILAYAAMA YITRMTRSFT LEQLSQDYVI
AARAKGVSPL GTIWHHVLPN IAVQLITILA ISYGGLLEGA VVTEIVFSWP GIGQYMTNAL
MIGDMNAIVA GTIIVGFIFM LLNFLADVAY AVFDPRMREA AR
|
|---|
| |