Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1877 |
Symbol | |
ID | 8012929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1861981 |
End bp | 1862691 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644824466 |
Product | GntR domain protein |
Protein accession | YP_002975698 |
Protein GI | 241204602 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.380896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.264595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC TCAGCCGGGG CCGGCAAAGA CTGGCGCAAC AGGTTATCGA TCAGCTGCGG GCGCAAATCG AAACGGGGAA GCTGCGCGTC GGCGACCAGC TGCCGACCGA GCCGCAGCTC GAAGCGACAT TCGGCGTCAG CCGCACTGTG GTGCGCGAGG CGATAGCCGA TCTGAGGTCG GCTGGCTTCG TCAAGCCGAT CCAGGGCAAA GGCGTCTTCG TCGCGGATCC GAAGACGCAT TCGATGCTTT CCTTAACACC AGTGGAAATC AAGAGCATTC CGGAAACCCT GGAATTGCTG GAGTTTCGCA TGGCCGCCGA GGGTGAAGCG GCGGCGATCG CCGCCTATCG CCGCACCGCC GAGCAGGAAG CGGCGATCCG CGAAGCCAAC CGCAGGATGG CGAACCTGAT CGAGACGGGA CAGCAGACGG TGGAGGCGGA TTATGCCTTC CACATGGCAA TCGCCGCCGC CACGAACAAC CGATTCTATG TTGCCGTCTT GCGCCAATTC GGCCCAAAAG CCATTCCCCG CGGCCAATTT CCGACGCTTC CCGAGGCCAA TGACCGCGAC TATCTTCAGA AGGTCTATGC CGAACATGTC GAGATCCTGT CAGCGATCGC CGACCAGGAT CCGGAGCGGG CGAGACAGGC AATGCGGGCG CATATGCTGG CCAGCCAACG CCGTTATCGA ATGCTCGCGG AGCAGCAATA G
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Protein sequence | MTTLSRGRQR LAQQVIDQLR AQIETGKLRV GDQLPTEPQL EATFGVSRTV VREAIADLRS AGFVKPIQGK GVFVADPKTH SMLSLTPVEI KSIPETLELL EFRMAAEGEA AAIAAYRRTA EQEAAIREAN RRMANLIETG QQTVEADYAF HMAIAAATNN RFYVAVLRQF GPKAIPRGQF PTLPEANDRD YLQKVYAEHV EILSAIADQD PERARQAMRA HMLASQRRYR MLAEQQ
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