Gene Rleg_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1876 
Symbol 
ID8012928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1860939 
End bp1861913 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content60% 
IMG OID644824465 
ProductMannonate dehydratase 
Protein accessionYP_002975697 
Protein GI241204601 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.463874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.188716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGG GAACACAGGT CGCCGCGCGG GACGACGACG ATTATCGTAT CTTCGCGCAA 
CTGGGCGTGA AGCATATCAA TGCCGACCCA CCGGGGAAGC CGAGCAGCTG GACGCTCTCC
GATCTCGAGC GCCATCGCGA CAAGGTCGAA AGCTTCGGCC TGATCCTCGA CATGATCCAG
TTGCCGCTGC CCTCGCAGCC GATCGAGAAG GCTTCCTATC CTGATATTCT GCTTGCCGGC
CCCGATCGCG ACAGACAGAT CGACGCCGTC TGCAAGCTGA TCGAGAATAC CGCCGCCGCC
GGCATTCCTG CGGTGAAGTA CAATCTCAAC CTGATCGGCA TTCCCCGTAC GCCGGATGAG
CCGGGGCGCG GCGGATCTCT GAATGCGAGC TTCCGCTGGG ACAAGACGGA TCAGCAGGCC
GAGCCCGGCC TTGCCGGTGT GCTTTCCGAA GACGAAAACT GGGAACGGAT CGACTATTTC
CTGGAACGCG TCGTTCCTGT CGCTGCAAGC AACCGCGTCC GGCTCGCCTG CCATCCGCAC
GATCCCTATA CGCCGCCGGG CTATCGCGGC GTCACGCGGG TGCTCGGCAC GGTGGAAGGC
CTAAAGAAAT TCGTGCTAAT GCGCGAAAAC CCCTATCACG GCCTCAATTT CTGCCAGGGT
TCGATCGGCG AGATGCTGGA AAATCCCGGC AAGGAAATCG ACGATGTCAT CCGCTGGTTC
GGCCAGCGCG GTAAGATCTT CAATGTTCAC TTCCGCAATA TTCGCGGCGG CAAGCTGTCC
TTCATGGAGA CCTTCCCTGA AGAAGGCGAC ATGGACATGG TCCGCTCCGC CAGGATCTAC
AAGGAGGTGG GCTTCAAATA CATGCTGATG CCCGACCATG TGCCGACCGT CAGCGGCAAG
GATCCAACCG CCACCGCATT TGCCTTCTGC TACGGCTATA TCGCCGCACT TCTGCAAGTG
CTCGACAGCG AGTGA
 
Protein sequence
MYLGTQVAAR DDDDYRIFAQ LGVKHINADP PGKPSSWTLS DLERHRDKVE SFGLILDMIQ 
LPLPSQPIEK ASYPDILLAG PDRDRQIDAV CKLIENTAAA GIPAVKYNLN LIGIPRTPDE
PGRGGSLNAS FRWDKTDQQA EPGLAGVLSE DENWERIDYF LERVVPVAAS NRVRLACHPH
DPYTPPGYRG VTRVLGTVEG LKKFVLMREN PYHGLNFCQG SIGEMLENPG KEIDDVIRWF
GQRGKIFNVH FRNIRGGKLS FMETFPEEGD MDMVRSARIY KEVGFKYMLM PDHVPTVSGK
DPTATAFAFC YGYIAALLQV LDSE