Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1859 |
Symbol | |
ID | 8012913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1843584 |
End bp | 1844849 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644824449 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002975681 |
Protein GI | 241204585 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0875597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.419035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACG AACTGCGTCC GATCGATGCT GCCGCAAGCG CCGTGTCGCA GAAACTTGAC TGGCGGCTGA TGCTGCCGGT TTTCATCATC GTCAGCCTCG ATGCCGCCAG CAGCGGCGCC ATCCTGCCGT TCCTGCCATT CTACCTCCGG AATCTCGGGG CGTCGCCGCT CGTTCTCGGG CTTGTTCTCG GTGCGGAAGC GCTCAGCCAG TTCGTTGCCG CGCCCTGGCT AGGTCAACTT TCCGACCGTT GCGGACGCAA GAGGGTTTTG CTCGCCAGCC AGGCCGGAGC GTTGATCAGC CTTTTGCTGC TGGCGCTTGC CAACAGCGTC GTCTTCGTGC TGCTGGCGCG GATCCTGCTC GGCCTGACCG CAGCCAATTT CTCGGCCGCG GCAGCCTATG CTGCCGACAA CAGCAGCGCC ACCACCCGGC GCCAGGCCAT CGGCATTCTG AGTGCGGGCC TCGGCCTTGG CGGAATGATC GGACCGAGCC TCTCCGGATA CCTTGCCGAC ACGTCTCTGA CGGCGCCGAT CTGGGTCGCG CTTGCCCTGT CGGCGACCAG CATGCTGGTG ACCGGGCTTT GGCTGAAAGG CGCCGATGCG CCCGGCCGGT TCGGCAACGA CAGCGAAGCG GACGAGACGG TCGGCGAGAA GGTTTCCTTC CGAACCCTGC TCGCCTCGCC GGTCATCCGC GTCCTCGTCG CCGTTCTTCT CTGCCACTAT TTCTCATACG GGATGTTCAG TTCGCAGCTC GCCGTTTTTC TGGCGGATAC ATTCACCTGG AATGAACATG CGTTCGGTCC GAAGGAGCTG GGTTACCTCC TGAGCGCCGA CGGTGCGATC AACGTCCTGG TCCAGCTTTT CCTGCTGAGA TGGCTCGGCG GCACCTTCTC TGAGCGAGGC CTGATCGTCC TGGTCTTCAC CATTCTCTCA ATTGGTTATG TCACGGCTGG CCTCGCCACC GACATCGTTA CCCTCGCCTT CGCCGTCCTT TGCATCAGCA CGGGCGTGGC ATTGGCGCGG CCGACATTCG TTGCAGCACT CTCCGTGCAT GTGCCGCAGC AACGCCAGGG CATCGTCATG GGAGCAACGC AGTCGCTCGT CGCCGTCACC GACATCGTCA CGCCGGTCCT TGCCGGCGTC ATTCTCGGGC AGAGCTTGTA TGGCGCATGG ATCGGCGCCG TGGTGGCGAT CGCACTGGTC GGAGCCGTCA TCGCCCGCAG CCGGCTGCCC GCAATCGATC CGGAGACGAG TGCTACCGGC GGCTGA
|
Protein sequence | MSDELRPIDA AASAVSQKLD WRLMLPVFII VSLDAASSGA ILPFLPFYLR NLGASPLVLG LVLGAEALSQ FVAAPWLGQL SDRCGRKRVL LASQAGALIS LLLLALANSV VFVLLARILL GLTAANFSAA AAYAADNSSA TTRRQAIGIL SAGLGLGGMI GPSLSGYLAD TSLTAPIWVA LALSATSMLV TGLWLKGADA PGRFGNDSEA DETVGEKVSF RTLLASPVIR VLVAVLLCHY FSYGMFSSQL AVFLADTFTW NEHAFGPKEL GYLLSADGAI NVLVQLFLLR WLGGTFSERG LIVLVFTILS IGYVTAGLAT DIVTLAFAVL CISTGVALAR PTFVAALSVH VPQQRQGIVM GATQSLVAVT DIVTPVLAGV ILGQSLYGAW IGAVVAIALV GAVIARSRLP AIDPETSATG G
|
| |