Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1832 |
Symbol | |
ID | 8012888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1824486 |
End bp | 1825214 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644824422 |
Product | ABC transporter related |
Protein accession | YP_002975655 |
Protein GI | 241204559 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0351546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGT TTCGCGCCGT CAATAAATGG TTTGGCCCAC TTCATGTGCT CAAGGATATC ACGCTCGACG TCGCGCCGCG CGAGGTCGTC GTCGTCTGCG GTCCATCCGG CTCGGGCAAG AGCACCTTGA TCCGTTGCGT GAACGGTTTG GAGACGATCC GTGACGGTGA CTTGGTTGTC GACGGTCAGC GTCTCGGCGA TCGCACCACC AACATGACAC TATTGCGCGC GGAGATCGGC TTTGTCTTCC AGTCGTTCAA TCTCTATCCG CACAAGACAG CGCTGGAGAA CGTCACGCTG GCGCCAATGC ACGTGCGCAA GATCCCGCGC GCCGAAGCCG AGAAGGCCGG CCGCGAGCTG CTGGCCAAGG TCGGGCTCGC GGACAAGGTC GATGCTTACC CCGCGCAACT GTCGGGCGGC CAGCAGCAGC GCGTGGCCAT CGCGCGCTGC CTCGGCATGC GCCCCAAGAT CATGCTGTTC GACGAACCAA CCTCGGCGCT CGATCCCGAG ATGATATCGG AAGTGCTCGA TGTCATGGTC GCCGTCGCGG AGGAAGGCAT GACGATGATG GTGGTGACCC ACGAAATGGG CTTCGCCCGC AAGGTCGCGC AACGCGTGGT GTTCATGGAC GCCGGCGCCA TCGTCGAAAG CGGCACGCCG GATGAATTCT TCGCCCACCC GAAGACCGAC CGCAGCCGCG CCTTCCTCGG CAAGATTCTG CGCCACTAG
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Protein sequence | MIEFRAVNKW FGPLHVLKDI TLDVAPREVV VVCGPSGSGK STLIRCVNGL ETIRDGDLVV DGQRLGDRTT NMTLLRAEIG FVFQSFNLYP HKTALENVTL APMHVRKIPR AEAEKAGREL LAKVGLADKV DAYPAQLSGG QQQRVAIARC LGMRPKIMLF DEPTSALDPE MISEVLDVMV AVAEEGMTMM VVTHEMGFAR KVAQRVVFMD AGAIVESGTP DEFFAHPKTD RSRAFLGKIL RH
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