Gene Rleg_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1828 
Symbol 
ID8012884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1821045 
End bp1822007 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content63% 
IMG OID644824419 
ProductAuxin Efflux Carrier 
Protein accessionYP_002975652 
Protein GI241204556 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.255201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGATA TTGTCAGCCT GCTATTGCCG TTCTTCGGCC TGATCCTGAT CGGTTACATC 
GCCGCCAAGG CGACCAAGCA GCCGGCCGAA GCGCTCGGCT GGCTGAACAC TTTCATCATC
TATGCCGCCC TGCCCGCGCT GTTCTTCAAG CTCGTCTCGC GCACGCCGAT CGAAGAGCTG
ACGCGCGTCG ATTTCATTGT CACCGATATC GCGGCGACCT ATGCGGTCTT CATCCTGCTT
TTCGTCATCG GCCGCGTCGT GCGCGGCAAT TCGCTGGCCG ATTGCACCAT CCAGTCCTTT
GCCGGCGCCT ATGGCAATAT CGGCTATATG GGACCGGGCC TGGCACTCTT GGCGCTCGGC
GAAGGCGCAG CCGTGCCGGT GGCGCTGATC ATCTGCTTCG AAAACGCGCT GCATTTCATC
GTGGCGCCGG CGCTGATGGC GGCGGCCGGC GACGACAAGG GTTCAACAGG CCAACTCGCC
GCCGATATCG TCCAGAAGGT GGCGCTGCAT CCCTTCATCC TGTCGACCGC GCTGGGCTTT
GCGGTGGCCG CCTTGCACAT CGACCAGCCG CCGGCGTTTC AGCGCCTCGT CGACTATCTC
GCCCAGGCGG CGGCGCCCTG CGCGCTCTTT GCCATGGGCG TGACGCTGGC GCTCCGACCG
TTGAAGCGGA TCCCGGCAGA AATCTCCTAT ATCGTGCCGG CGAAGCTGAT CCTTCATCCG
ATCGCGGTCT TCGTTGCGCT GACGGCGGTT GGCGGTTTCG AACCGGTCTG GATCCAGGCG
GCCGTGCTGC TCGCCTCACT GCCGACGGCG ACCAACGTCT TCGTCATCGG TCAGCAGTAT
GGCGTCTGGC AGGAGCGCGC CTCGGCGACG ATCCTGATCA CGACGGTGTT TTCGGTGGTG
ACTGTTTCGC TCTGGCTAAT CGTGATCCGC TCAGGCCTTC TTCCGCTTCA GCTTTTCCCG
TAG
 
Protein sequence
MADIVSLLLP FFGLILIGYI AAKATKQPAE ALGWLNTFII YAALPALFFK LVSRTPIEEL 
TRVDFIVTDI AATYAVFILL FVIGRVVRGN SLADCTIQSF AGAYGNIGYM GPGLALLALG
EGAAVPVALI ICFENALHFI VAPALMAAAG DDKGSTGQLA ADIVQKVALH PFILSTALGF
AVAALHIDQP PAFQRLVDYL AQAAAPCALF AMGVTLALRP LKRIPAEISY IVPAKLILHP
IAVFVALTAV GGFEPVWIQA AVLLASLPTA TNVFVIGQQY GVWQERASAT ILITTVFSVV
TVSLWLIVIR SGLLPLQLFP