Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1828 |
Symbol | |
ID | 8012884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1821045 |
End bp | 1822007 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644824419 |
Product | Auxin Efflux Carrier |
Protein accession | YP_002975652 |
Protein GI | 241204556 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.255201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCGATA TTGTCAGCCT GCTATTGCCG TTCTTCGGCC TGATCCTGAT CGGTTACATC GCCGCCAAGG CGACCAAGCA GCCGGCCGAA GCGCTCGGCT GGCTGAACAC TTTCATCATC TATGCCGCCC TGCCCGCGCT GTTCTTCAAG CTCGTCTCGC GCACGCCGAT CGAAGAGCTG ACGCGCGTCG ATTTCATTGT CACCGATATC GCGGCGACCT ATGCGGTCTT CATCCTGCTT TTCGTCATCG GCCGCGTCGT GCGCGGCAAT TCGCTGGCCG ATTGCACCAT CCAGTCCTTT GCCGGCGCCT ATGGCAATAT CGGCTATATG GGACCGGGCC TGGCACTCTT GGCGCTCGGC GAAGGCGCAG CCGTGCCGGT GGCGCTGATC ATCTGCTTCG AAAACGCGCT GCATTTCATC GTGGCGCCGG CGCTGATGGC GGCGGCCGGC GACGACAAGG GTTCAACAGG CCAACTCGCC GCCGATATCG TCCAGAAGGT GGCGCTGCAT CCCTTCATCC TGTCGACCGC GCTGGGCTTT GCGGTGGCCG CCTTGCACAT CGACCAGCCG CCGGCGTTTC AGCGCCTCGT CGACTATCTC GCCCAGGCGG CGGCGCCCTG CGCGCTCTTT GCCATGGGCG TGACGCTGGC GCTCCGACCG TTGAAGCGGA TCCCGGCAGA AATCTCCTAT ATCGTGCCGG CGAAGCTGAT CCTTCATCCG ATCGCGGTCT TCGTTGCGCT GACGGCGGTT GGCGGTTTCG AACCGGTCTG GATCCAGGCG GCCGTGCTGC TCGCCTCACT GCCGACGGCG ACCAACGTCT TCGTCATCGG TCAGCAGTAT GGCGTCTGGC AGGAGCGCGC CTCGGCGACG ATCCTGATCA CGACGGTGTT TTCGGTGGTG ACTGTTTCGC TCTGGCTAAT CGTGATCCGC TCAGGCCTTC TTCCGCTTCA GCTTTTCCCG TAG
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Protein sequence | MADIVSLLLP FFGLILIGYI AAKATKQPAE ALGWLNTFII YAALPALFFK LVSRTPIEEL TRVDFIVTDI AATYAVFILL FVIGRVVRGN SLADCTIQSF AGAYGNIGYM GPGLALLALG EGAAVPVALI ICFENALHFI VAPALMAAAG DDKGSTGQLA ADIVQKVALH PFILSTALGF AVAALHIDQP PAFQRLVDYL AQAAAPCALF AMGVTLALRP LKRIPAEISY IVPAKLILHP IAVFVALTAV GGFEPVWIQA AVLLASLPTA TNVFVIGQQY GVWQERASAT ILITTVFSVV TVSLWLIVIR SGLLPLQLFP
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