Gene Rleg_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1818 
Symbol 
ID8012875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1811316 
End bp1812179 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID644824409 
ProductD-amino acid aminotransferase 
Protein accessionYP_002975642 
Protein GI241204546 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01121] D-amino acid aminotransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.514691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0349622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGAA TTGCCTATGT GAATGGCCGT TACGTCAAGC ATTCCAATGC CAGCGTGCAT 
ATCGAGGATC GCGGCTACCA GTTCGCCGAT GGCGTCTATG AGGTCTGCGA GGTGCGCCAC
GGCTATATCG TCGATCTCAC GCGCCACCTG AACCGTCTCG ACCGATCGCT TGGAGAGTTG
CGCATCGCCT GGCCGATGGG CCGGGCGGCG CTGACGCAGG TCATTCGCGA GACGCTGCGC
CGCAACCATG TCCGCAACGG GCTTTTCTAC ATGCAGGTGA CACGCGGCGT CGCCCGCCGC
GATCACGTCT TTCCGGCCGA GGGAACGCCG CCCTCACTCG TGATCACCGC CAAGAGCACC
GATGCCAGGA TCATCGCCGC CAAGAACGCC AATGGCATCA AGGCGATCAC CCTTGTCGAT
AATCGCTGGG ACCGCGTCGA CATCAAGTCC GTCGGCTTGC TGCCGAATGC CATGGCCCGC
CAGCAGGCCA AGGAAGCCGG CGCCCAGGAA GCGATCTATA CCGACGGCGA CGGCATGGTG
AAGGAAGGGG CGGCGACCAA TGTCTGGATC GTCGATCCTG ATGGAACGCT GGTGACGCGC
CCGGCCGAAC ACGGCATTCT GCGCGGCATT ACCCGCACCA CTCTGATGGA TGTCGGAGCC
AAGCTGGGGT TGACGATCAC TGAGCGGAAC TTCTCCGTTT CGGAGATGCT CGCAGCCCGC
GAGGTCTTCC TCACTGCAGC CACAAGCATT TGTTTTCCGG TCGTTTCCGT CGACGGCCAG
CCCATTGCCA ACGGTCATCC GGGCAGCGTT TCGCAGAAAG TCCGCGAGGC CTTTTTCGAC
GTTGCGGAAA AGATTGCGAT TTGA
 
Protein sequence
MPRIAYVNGR YVKHSNASVH IEDRGYQFAD GVYEVCEVRH GYIVDLTRHL NRLDRSLGEL 
RIAWPMGRAA LTQVIRETLR RNHVRNGLFY MQVTRGVARR DHVFPAEGTP PSLVITAKST
DARIIAAKNA NGIKAITLVD NRWDRVDIKS VGLLPNAMAR QQAKEAGAQE AIYTDGDGMV
KEGAATNVWI VDPDGTLVTR PAEHGILRGI TRTTLMDVGA KLGLTITERN FSVSEMLAAR
EVFLTAATSI CFPVVSVDGQ PIANGHPGSV SQKVREAFFD VAEKIAI