Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1818 |
Symbol | |
ID | 8012875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1811316 |
End bp | 1812179 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644824409 |
Product | D-amino acid aminotransferase |
Protein accession | YP_002975642 |
Protein GI | 241204546 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.514691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0349622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGAA TTGCCTATGT GAATGGCCGT TACGTCAAGC ATTCCAATGC CAGCGTGCAT ATCGAGGATC GCGGCTACCA GTTCGCCGAT GGCGTCTATG AGGTCTGCGA GGTGCGCCAC GGCTATATCG TCGATCTCAC GCGCCACCTG AACCGTCTCG ACCGATCGCT TGGAGAGTTG CGCATCGCCT GGCCGATGGG CCGGGCGGCG CTGACGCAGG TCATTCGCGA GACGCTGCGC CGCAACCATG TCCGCAACGG GCTTTTCTAC ATGCAGGTGA CACGCGGCGT CGCCCGCCGC GATCACGTCT TTCCGGCCGA GGGAACGCCG CCCTCACTCG TGATCACCGC CAAGAGCACC GATGCCAGGA TCATCGCCGC CAAGAACGCC AATGGCATCA AGGCGATCAC CCTTGTCGAT AATCGCTGGG ACCGCGTCGA CATCAAGTCC GTCGGCTTGC TGCCGAATGC CATGGCCCGC CAGCAGGCCA AGGAAGCCGG CGCCCAGGAA GCGATCTATA CCGACGGCGA CGGCATGGTG AAGGAAGGGG CGGCGACCAA TGTCTGGATC GTCGATCCTG ATGGAACGCT GGTGACGCGC CCGGCCGAAC ACGGCATTCT GCGCGGCATT ACCCGCACCA CTCTGATGGA TGTCGGAGCC AAGCTGGGGT TGACGATCAC TGAGCGGAAC TTCTCCGTTT CGGAGATGCT CGCAGCCCGC GAGGTCTTCC TCACTGCAGC CACAAGCATT TGTTTTCCGG TCGTTTCCGT CGACGGCCAG CCCATTGCCA ACGGTCATCC GGGCAGCGTT TCGCAGAAAG TCCGCGAGGC CTTTTTCGAC GTTGCGGAAA AGATTGCGAT TTGA
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Protein sequence | MPRIAYVNGR YVKHSNASVH IEDRGYQFAD GVYEVCEVRH GYIVDLTRHL NRLDRSLGEL RIAWPMGRAA LTQVIRETLR RNHVRNGLFY MQVTRGVARR DHVFPAEGTP PSLVITAKST DARIIAAKNA NGIKAITLVD NRWDRVDIKS VGLLPNAMAR QQAKEAGAQE AIYTDGDGMV KEGAATNVWI VDPDGTLVTR PAEHGILRGI TRTTLMDVGA KLGLTITERN FSVSEMLAAR EVFLTAATSI CFPVVSVDGQ PIANGHPGSV SQKVREAFFD VAEKIAI
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