| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1811 |
|---|
| Symbol | |
|---|
| ID | 8015605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1802310 |
|---|
| End bp | 1803464 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644824402 |
|---|
| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
|---|
| Protein accession | YP_002975635 |
|---|
| Protein GI | 241204539 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00659611 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGG ATATGACATC TCCGTCCGAT CACGCCGGCG GGACCGTCGC CATGGCCGTG
CTGAACGCCA TCCAGAACCC CGTCATCATG GTCGACGAAT CCGGCTTCGT CGTTTTCGCC
AATTGGGAGG CGGAGGCCTT CTTCGGCGCC AGCGCCTCGC ATCTGGCGCG TTACCGGATT
TCGACTTTCA TTCCTTTCGG CAGCCCGCTG CTTGCCCTGA TCGACCAGGT GCGCGAGCGC
AAGGCGCCGG TCAACGAATA TCGCGTCGAC CTGAGTTCGC CCCGCCTCGG CCAGGACAAG
CTCGTCGATC TCTACGTCGC CCCGGTGCTC AGCGAGCCCG GCGCCGTCGT CATCGTCTTT
CAGGAACGCT CGATGGCCGA CAAGATCGAC CGGCAGCTGA CGCATCGCGC CGCCGCCCGC
TCGGTGACCG GTCTTGCCTC GATGCTGGCG CACGAGATCA AAAACCCGCT CTCCGGCATC
CGCGGCGCCG CCCAGCTGCT CGAACAATCT GCGGACGACG ACGATCGGGC GCTGACCCGG
CTGATCTGCG ACGAGACCGA TCGCATCGTT TCGCTGGTCG ACCGGATGGA AGTCTTTTCC
GACGAACGCC CTGTCGACCG CATGCCGGTC AATATCCATT CGGTGCTCGA TCATGTGAAG
GCGGTCGCCA AGGCGGGTTT TGCCCGCAAC ATTCGGGTCA CCGAGAGTTA CGATCCGTCG
CTGCCGGCCG TCTATGCCAA TCGCGACCAG CTCGTCCAGG TCTTCCTCAA TCTGGTGAAA
AACGCCGCCG AAGCGGTCGG CGATCGGCCG GACGGCGAAA TCATGCTGAC GACGGCCTAT
CGCCCCGGCA TCCGTCTTTC GGTCGCCGGC ACGCGCGAAA AGATCTCGCT GCCGCTGGAA
TTCTGCGTCC ACGATAACGG CCCGGGCGTT CCCCTCGATC TGTTGCCGCA TCTCTTCGAT
CCCTTCATCA CCACCAAGCC GAACGGCAGC GGCCTCGGCC TGGCGCTGGT CGCCAAGATC
ATCGGCGATC ACGGCGGCAT CATCGAATGC GACAGCCAGA ACAGCCGCAC GACATTCCGC
GTTCTCATGC CGGCGTCGAA GGACGCCTCG CTTGAAGACG CCTCTATAGC AAGCTCGACA
GGACCTTCTC GATGA
|
|---|
| Protein sequence | MTKDMTSPSD HAGGTVAMAV LNAIQNPVIM VDESGFVVFA NWEAEAFFGA SASHLARYRI
STFIPFGSPL LALIDQVRER KAPVNEYRVD LSSPRLGQDK LVDLYVAPVL SEPGAVVIVF
QERSMADKID RQLTHRAAAR SVTGLASMLA HEIKNPLSGI RGAAQLLEQS ADDDDRALTR
LICDETDRIV SLVDRMEVFS DERPVDRMPV NIHSVLDHVK AVAKAGFARN IRVTESYDPS
LPAVYANRDQ LVQVFLNLVK NAAEAVGDRP DGEIMLTTAY RPGIRLSVAG TREKISLPLE
FCVHDNGPGV PLDLLPHLFD PFITTKPNGS GLGLALVAKI IGDHGGIIEC DSQNSRTTFR
VLMPASKDAS LEDASIASST GPSR
|
|---|
| |