| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1809 |
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| Symbol | ispDF |
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| ID | 8012867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 1799934 |
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| End bp | 1801151 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644824400 |
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| Product | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein |
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| Protein accession | YP_002975633 |
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| Protein GI | 241204537 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.274238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00324888 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCAAA TGCCTTCTAA GCAACCGATA TCGGCTGGAA TTGTCATCGT GGCCGCCGGC
CGCGGCGAGC GCGCAGGATC ATCCAAGGAA GGCCCCAAGC AGTATCGCAT GATCGGCGGC
AAGCCGGTTA TCGTGCATAC GCTTGAAAAC TTCATGACAT GGGAAGCGGC AACTGAGATC
GTCGTCGTCA TCCATCCCGA TGACGAGGCG CTGTTTGCGA GAGCCTTCCG CCACATCATC
TCGGCAACAC CGATCGAAAC GGTGCATGGG GGTGCGACTA GGCAGCAATC CGTGCTTGCC
GGCCTCAGAT ACCTCAAGGA CAAGCAAATC AGCCATGTGC TGATCCACGA TGCCGTTCGG
CCGTTCTTCG ACCATGATCT CCTGGACCGC ATTGCCGAGA GCCTTAATGC CGGCGCGCAG
GCGGTCCTGC CGGCGATCCC GGTCACCGAT ACGCTGAAAC GCGCCGACAA CACAGGCACG
GTGCTGACGA CGGTTTCACG CGAGCATCTT TACGCTGCGC AGACGCCGCA ATCCTTCGCC
TTCGAAACGA TCCTCGAGGC TCATGAGAAG GCGGCTTCAA GCGGGCGAAG CGATTTCACC
GACGATGCCT CGATCGCCGA ATGGCTGGGC ATTCCGGTGA CGATCGTCGA GGGCACGGCC
GACAACGTCA AGCTGACGGT CAAGAACGAT ATCGCCATGG CCGACGACAA GCTGTCGGCT
CCGCTGCTTC CGGACGTGCG CACCGGCAAC GGCTACGACG TGCACCAGCT CGTAGTCGGC
GATGGCGTGA CACTCTGCGG CGTGTTCATT CCGCATGACC AGAAGCTCAA AGGACACTCC
GATGCCGACG TCGCGCTGCA TGCGCTGACG GACGCGCTGC TTGCCACGTG CGGCGCCGGC
GATATCGGCG ATCATTTCCC ACCGTCCGAT CCGCAATGGA AGGGGGCAGC TTCGCGGATC
TTCATCGAGC ATGCTGCCCG GATCGTGCGC GAGCGCGGCG GCACGATCAT GAATGCCGAC
GTCTCGCTGA TCGCCGAGGC GCCGAAGGTC GGCCCGCATC GCGACGCCAT GCGGGCGAAA
CTATCGGACT ATCTCGGCAT TGACATCGAG CGTTGCTCGG TCAAGGCGAC GACCAACGAG
ACGATCGGCT TCGTCGGCCG GCGCGAAGGC ATCGCGGCGA TTGCGACGGC GACCGTCGTC
TATCGCGGGA GGAAATGA
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| Protein sequence | MLQMPSKQPI SAGIVIVAAG RGERAGSSKE GPKQYRMIGG KPVIVHTLEN FMTWEAATEI
VVVIHPDDEA LFARAFRHII SATPIETVHG GATRQQSVLA GLRYLKDKQI SHVLIHDAVR
PFFDHDLLDR IAESLNAGAQ AVLPAIPVTD TLKRADNTGT VLTTVSREHL YAAQTPQSFA
FETILEAHEK AASSGRSDFT DDASIAEWLG IPVTIVEGTA DNVKLTVKND IAMADDKLSA
PLLPDVRTGN GYDVHQLVVG DGVTLCGVFI PHDQKLKGHS DADVALHALT DALLATCGAG
DIGDHFPPSD PQWKGAASRI FIEHAARIVR ERGGTIMNAD VSLIAEAPKV GPHRDAMRAK
LSDYLGIDIE RCSVKATTNE TIGFVGRREG IAAIATATVV YRGRK
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