Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1793 |
Symbol | |
ID | 8012852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1786655 |
End bp | 1787500 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644824384 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_002975617 |
Protein GI | 241204521 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0627497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000493086 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCACTG ATACGAATTC CGAAGTCAGG ATCGGCGAAG GCCAAGGCCA GGTCAGCTTT TCCAATACCG GCCGCCTGTC GCTGATTGCC GGTCCCTGCC AGATGGAGAG CCGCGACCAC GCCTTCATGG TCGCCGGCAC GCTGAAGGAG CTTTGCGGCA AGCTCGGCAT CGGCCTCGTT TACAAGAGCT CCTTCGACAA GGCGAACCGC ACCTCGCTGT CGGCCGAACG CGGTATCGGG ATTGAAAAAG GCATGGAGGT CTTTGCCGAC CTCAAAAAGG AGTTCGGCTT TCCCGTCCTG ACCGACGTTC ATACCGCCGA GCAATGCGCG GAGGTGGCAA AGGTCGTCGA CGTCCTGCAG ATCCCGGCCT TCCTCTGCCG CCAGACCGAC CTTCTCATCG CCGCCGCCAA GACCGGCCGC GTCGTCAATG TCAAGAAGGG CCAGTTCCTC GCTCCCTGGG ATATGAAGAA TGTTCTGAAG AAGCTCAACG CCAGCGGCAA TCCGAACGTG CTGCTTTGCG AGCGCGGCGC CTCCTTTGGT TACAATACGC TGGTTTCCGA CATGCGCTCG CTGCCGATCA TGGCGGCGAT GGGTGCGCCC GTTGTCTTCG ATGCGACCCA TTCCGTAGCG CAGCCGGGCG GGCAGGGCGA TTCCTCCGGC GGTCAGCGGG AATTCGTAGA AACCCTGGCG CGGGCAGCAG TGGCTGCCGG TATTGCCGGC GTCTTCGTCG AAACCCATCA GGACCCCGAC AATGCCCCTT CCGACGGCCC GAACATGGTC TATCTCAAGG ACATGCCGCG GCTTCTCGAA AAGCTGCTCG CCTTCGATGC GGTCGCCAAG GCTTGA
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Protein sequence | MSTDTNSEVR IGEGQGQVSF SNTGRLSLIA GPCQMESRDH AFMVAGTLKE LCGKLGIGLV YKSSFDKANR TSLSAERGIG IEKGMEVFAD LKKEFGFPVL TDVHTAEQCA EVAKVVDVLQ IPAFLCRQTD LLIAAAKTGR VVNVKKGQFL APWDMKNVLK KLNASGNPNV LLCERGASFG YNTLVSDMRS LPIMAAMGAP VVFDATHSVA QPGGQGDSSG GQREFVETLA RAAVAAGIAG VFVETHQDPD NAPSDGPNMV YLKDMPRLLE KLLAFDAVAK A
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