| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1793 |
|---|
| Symbol | |
|---|
| ID | 8012852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1786655 |
|---|
| End bp | 1787500 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644824384 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_002975617 |
|---|
| Protein GI | 241204521 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0627497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000493086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG ATACGAATTC CGAAGTCAGG ATCGGCGAAG GCCAAGGCCA GGTCAGCTTT
TCCAATACCG GCCGCCTGTC GCTGATTGCC GGTCCCTGCC AGATGGAGAG CCGCGACCAC
GCCTTCATGG TCGCCGGCAC GCTGAAGGAG CTTTGCGGCA AGCTCGGCAT CGGCCTCGTT
TACAAGAGCT CCTTCGACAA GGCGAACCGC ACCTCGCTGT CGGCCGAACG CGGTATCGGG
ATTGAAAAAG GCATGGAGGT CTTTGCCGAC CTCAAAAAGG AGTTCGGCTT TCCCGTCCTG
ACCGACGTTC ATACCGCCGA GCAATGCGCG GAGGTGGCAA AGGTCGTCGA CGTCCTGCAG
ATCCCGGCCT TCCTCTGCCG CCAGACCGAC CTTCTCATCG CCGCCGCCAA GACCGGCCGC
GTCGTCAATG TCAAGAAGGG CCAGTTCCTC GCTCCCTGGG ATATGAAGAA TGTTCTGAAG
AAGCTCAACG CCAGCGGCAA TCCGAACGTG CTGCTTTGCG AGCGCGGCGC CTCCTTTGGT
TACAATACGC TGGTTTCCGA CATGCGCTCG CTGCCGATCA TGGCGGCGAT GGGTGCGCCC
GTTGTCTTCG ATGCGACCCA TTCCGTAGCG CAGCCGGGCG GGCAGGGCGA TTCCTCCGGC
GGTCAGCGGG AATTCGTAGA AACCCTGGCG CGGGCAGCAG TGGCTGCCGG TATTGCCGGC
GTCTTCGTCG AAACCCATCA GGACCCCGAC AATGCCCCTT CCGACGGCCC GAACATGGTC
TATCTCAAGG ACATGCCGCG GCTTCTCGAA AAGCTGCTCG CCTTCGATGC GGTCGCCAAG
GCTTGA
|
|---|
| Protein sequence | MSTDTNSEVR IGEGQGQVSF SNTGRLSLIA GPCQMESRDH AFMVAGTLKE LCGKLGIGLV
YKSSFDKANR TSLSAERGIG IEKGMEVFAD LKKEFGFPVL TDVHTAEQCA EVAKVVDVLQ
IPAFLCRQTD LLIAAAKTGR VVNVKKGQFL APWDMKNVLK KLNASGNPNV LLCERGASFG
YNTLVSDMRS LPIMAAMGAP VVFDATHSVA QPGGQGDSSG GQREFVETLA RAAVAAGIAG
VFVETHQDPD NAPSDGPNMV YLKDMPRLLE KLLAFDAVAK A
|
|---|
| |