Gene Rleg_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1780 
Symbol 
ID8012841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1771101 
End bp1771844 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID644824371 
Productundecaprenyl diphosphate synthase 
Protein accessionYP_002975604 
Protein GI241204508 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.959481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAT CTGTATTTGT GACTGTGCCA GAGCATGTTG CCATCATCAT GGACGGCAAT 
GGCCGTTGGG CCAAGCAACG TGGCCTGCCG CGCACGATGG GCCATCGCAA GGGCGTCGAG
GCGGTGCGTG AGACAGTCCG CGCCGCTGGT GCGGCCGGCA TAAAATATCT GACCCTCTTT
GCCTTCTCCT CGGAGAACTG GCGCCGGCCC GAAGCAGAGG TCTCCGATCT GCTCGGCCTG
CTCAAGGCTT TTATCCGGCG CGACCTCGCC GAGCTTCATC GCCAGAACGT GCGGATCAAG
GTGATCGGCG ACCGCGACAG CCTGCGCAGC GACATTCTCG GCCTGCTGCT GGAGGCGGAG
GAGACGACCA AGGACAACAC GTCGCTGACG CTCGTCATCG CCTTCAACTA TGGTTCGCGC
GACGAGATCG CCCGCGCCGT CGTCAGCCTC GCCCGGGATG TCGAAGCCGG CCGCCTGAGA
GCGCAGGATA TTACGCCCGC CCTGATCAAC GCCCGTCTCG ATACGGCCGG CATCCCCGAT
CCGGATCTCA TCATCCGCAC CAGCGGCGAG GAGCGGCTTT CCAACTTCCT CCTCTGGCAG
GCCGCCTATT CGGAATTCAT CTTCCTTCCG GAATATTGGC CGGATTTCAG CCCCGAGATC
TTCCGCTCGG CGCTCGATAC ATTCGCCTCT CGTGACCGGC GCTTCGGCGG CCTGTCGTCG
CAGGCGGCCG CGGTCGGCAC CTGA
 
Protein sequence
MSESVFVTVP EHVAIIMDGN GRWAKQRGLP RTMGHRKGVE AVRETVRAAG AAGIKYLTLF 
AFSSENWRRP EAEVSDLLGL LKAFIRRDLA ELHRQNVRIK VIGDRDSLRS DILGLLLEAE
ETTKDNTSLT LVIAFNYGSR DEIARAVVSL ARDVEAGRLR AQDITPALIN ARLDTAGIPD
PDLIIRTSGE ERLSNFLLWQ AAYSEFIFLP EYWPDFSPEI FRSALDTFAS RDRRFGGLSS
QAAAVGT