Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1780 |
Symbol | |
ID | 8012841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1771101 |
End bp | 1771844 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644824371 |
Product | undecaprenyl diphosphate synthase |
Protein accession | YP_002975604 |
Protein GI | 241204508 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.959481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGAAT CTGTATTTGT GACTGTGCCA GAGCATGTTG CCATCATCAT GGACGGCAAT GGCCGTTGGG CCAAGCAACG TGGCCTGCCG CGCACGATGG GCCATCGCAA GGGCGTCGAG GCGGTGCGTG AGACAGTCCG CGCCGCTGGT GCGGCCGGCA TAAAATATCT GACCCTCTTT GCCTTCTCCT CGGAGAACTG GCGCCGGCCC GAAGCAGAGG TCTCCGATCT GCTCGGCCTG CTCAAGGCTT TTATCCGGCG CGACCTCGCC GAGCTTCATC GCCAGAACGT GCGGATCAAG GTGATCGGCG ACCGCGACAG CCTGCGCAGC GACATTCTCG GCCTGCTGCT GGAGGCGGAG GAGACGACCA AGGACAACAC GTCGCTGACG CTCGTCATCG CCTTCAACTA TGGTTCGCGC GACGAGATCG CCCGCGCCGT CGTCAGCCTC GCCCGGGATG TCGAAGCCGG CCGCCTGAGA GCGCAGGATA TTACGCCCGC CCTGATCAAC GCCCGTCTCG ATACGGCCGG CATCCCCGAT CCGGATCTCA TCATCCGCAC CAGCGGCGAG GAGCGGCTTT CCAACTTCCT CCTCTGGCAG GCCGCCTATT CGGAATTCAT CTTCCTTCCG GAATATTGGC CGGATTTCAG CCCCGAGATC TTCCGCTCGG CGCTCGATAC ATTCGCCTCT CGTGACCGGC GCTTCGGCGG CCTGTCGTCG CAGGCGGCCG CGGTCGGCAC CTGA
|
Protein sequence | MSESVFVTVP EHVAIIMDGN GRWAKQRGLP RTMGHRKGVE AVRETVRAAG AAGIKYLTLF AFSSENWRRP EAEVSDLLGL LKAFIRRDLA ELHRQNVRIK VIGDRDSLRS DILGLLLEAE ETTKDNTSLT LVIAFNYGSR DEIARAVVSL ARDVEAGRLR AQDITPALIN ARLDTAGIPD PDLIIRTSGE ERLSNFLLWQ AAYSEFIFLP EYWPDFSPEI FRSALDTFAS RDRRFGGLSS QAAAVGT
|
| |