Gene Rleg_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1708 
Symbol 
ID8012774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1706250 
End bp1707437 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID644824295 
ProductL-lactate dehydrogenase (cytochrome) 
Protein accessionYP_002975533 
Protein GI241204437 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.80121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.602463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC GCAGCGGCAA CACCGACCGA ACGACCCGGC TCTGCCGCGA AGTGCTCTGC 
CTCGATGACT TTGAAATAAA GGCGCGGCGA CATCTGCCAA AGCCTCTGTT TGGTTATATC
GCAGGCGCGA CCGAGACCAA TGCGTCGCTG CGGCATAACG CAGAAGCTTT CCAGGCCTAT
GCCTTCCGGC CTCGTGTCCT TCGGGACGTC TCGAAACGCA GCACCGAGAC GAGCCTCTTC
GGCAAGACCC ATGCCGCGCC ATTCGGCATC GCGCCGATGG GTATCAGCGC GCTGATGGCC
TATCGAGGTG ACATCGTGCT TGCGCAAGGA GCGGATCAAT CGGGAATCCC GATGATCATA
AGCGGTTCAT CACTTATCCC CTTGGAAGAG ATAGCTGCAG TTTCGCCGCA AGCATGGTTT
CAGGCCTATC TCCCCGGCGA ACCCGACCGT ATCGATGCTT TGATCGATCG CGTCGGCGCG
GCCGGCTTGC GCACGCTTCT GCTGACCGTG GACACAGCCA CGCTGCCAAA CCGTGAAAAC
AATGTAAGGG CCGGATTTTC GACACCTCTG CGTCCCGGTC TCCGCCTGGC GTGGCAGGGC
ATCTCGCACC CGCGCTGGAC CACCGGCACA TTCCTGCGCA CGATCGTCCG GCACGGCATT
CCGCATTTTG AAAATTCCTA CGCCACAAGA GGCGCGCCGA TCATCTCTTC GAATGTGACG
CGCGATTTCG GCAGGCGCGA CCATCTCAAC TGGAACCATC TGGAGCGGAT ACGCAACAGG
TGGTCCGGCA AACTCGTGGT CAAGGGGATC ATGCATCCTG ACGACGCGGC CCTGGCTGTC
GACACCGGAG CGGATGGCGT GATCGTCTCC AATCATGGCG GCCGCCAGCT CGACGGCACC
GCATCTCCCC TTCAGGTCCT TCCGGAGATT GCGTCCCGTG TCGGCGACAG CGTTGCCGTC
ATGGTCGATG GCGGTTTCAG GCGTGGAACG GACATCATGA AGGCCCTCGC ACTCGGGGCC
TGTTTCGTGT TCGTGGGCAG GCCGTTCCTT TATGCCGCAG CCGTCGCGGG CCTACCGGGT
GTGCTCAAGG CGGCCGATAT CCTGAAGACG GAACTGCATA GCAATATGGC GTTGCTCGGC
GTCACCAAGG TGGGCGATAT TTCCGCGGAC TACATCACCC ATGCATGA
 
Protein sequence
MTIRSGNTDR TTRLCREVLC LDDFEIKARR HLPKPLFGYI AGATETNASL RHNAEAFQAY 
AFRPRVLRDV SKRSTETSLF GKTHAAPFGI APMGISALMA YRGDIVLAQG ADQSGIPMII
SGSSLIPLEE IAAVSPQAWF QAYLPGEPDR IDALIDRVGA AGLRTLLLTV DTATLPNREN
NVRAGFSTPL RPGLRLAWQG ISHPRWTTGT FLRTIVRHGI PHFENSYATR GAPIISSNVT
RDFGRRDHLN WNHLERIRNR WSGKLVVKGI MHPDDAALAV DTGADGVIVS NHGGRQLDGT
ASPLQVLPEI ASRVGDSVAV MVDGGFRRGT DIMKALALGA CFVFVGRPFL YAAAVAGLPG
VLKAADILKT ELHSNMALLG VTKVGDISAD YITHA