Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1687 |
Symbol | |
ID | 8012754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1683033 |
End bp | 1683860 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644824274 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_002975513 |
Protein GI | 241204417 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTG ATACCGAAGA CAAGCCGCAG CCGTTGATCG AGCACCTGAT GGAGCTGCGC AGGCGGCTGA TGTGGTCGAT CGGCGCGTTT TTCGTCGCCT TCATCGCATG CTTCTTTTTT GCCAAGCATC TCTTCAACTA TCTGGTCATT CCCTACAAGA CAGCCGTAAT TTGGGCGCAT CTTGACGTCG AGAAAGCCCA GCTCATCTAT ACCGCGCCGC AGGAATTCTT CTTCACCCAG GTCAAGGTGG CGATGTTCGG CGGCCTTGTG GTCGCTTTCC CGATCATTGC CGCCCAGGTC TACAAGTTCG TGGCGCCGGG TCTCTACAAG AACGAGCGCC AGGCTTTCCT GCCGTTCCTG ATCGCCTCGC CGGTGCTGTT CCTGATGGGC GGCGCGCTCG TCTATTTCTT CTTCACGCCG ATGGTCATGT GGTTCTTCCT GTCGATGCAG CAGGCGCCGG GTCATGACGA GGTGGCCATC TCGCTGATGC CGAAGGTCTC GGAATATCTG AGCCTGATCA TGACGCTGGT CTTCTCCTTC GGCCTCGTCT TCCAGCTTCC CGTCGTCACT ACGCTGCTCG CCCGTGTCGG TCTTCTGACG TCGCAATGGC TCGCCGAAAA GCGCAAGTTT GCCATCGTGC TCGCCTTTGT CGTGGCCGCC GTGCTGACGC CGCCGGATCC GATGTCCCAG ATCGGCCTTG CGATACCGAC GATCCTTCTC TACGAGATTT CCATCCATGC GGCGCGACTC GTGGAGCGCC AGCGTGCCCG GCAGGCGGTC GAAAAGGAAA CCGGATCCGC AGATGTTGCC AAGACGGACA GCGTCTGA
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Protein sequence | MSGDTEDKPQ PLIEHLMELR RRLMWSIGAF FVAFIACFFF AKHLFNYLVI PYKTAVIWAH LDVEKAQLIY TAPQEFFFTQ VKVAMFGGLV VAFPIIAAQV YKFVAPGLYK NERQAFLPFL IASPVLFLMG GALVYFFFTP MVMWFFLSMQ QAPGHDEVAI SLMPKVSEYL SLIMTLVFSF GLVFQLPVVT TLLARVGLLT SQWLAEKRKF AIVLAFVVAA VLTPPDPMSQ IGLAIPTILL YEISIHAARL VERQRARQAV EKETGSADVA KTDSV
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