Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1658 |
Symbol | |
ID | 8012727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1649880 |
End bp | 1650971 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644824243 |
Product | esterase, PHB depolymerase family |
Protein accession | YP_002975484 |
Protein GI | 241204388 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.044626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.200304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCTA TGTCGGACAC GCTCGCACGC CTTGCTGCGC TGCGAGGAAC CCTTCGCGCC CAACCCACGC AGAACAACCC CGACCTGGTC GCCTTGGATG CGTTTGGCTC AAACCCCGGC GCCTTGGGGG GCTACACCTA TTTGCCGTCG AAGCGGGGGA AAAACCTAGC CCTGGTCGTC GTCCTGCACG GCTGCACCCA GACTGCCGCC GGGTATGATA GCGGGTCCGG GTGGTCGCGA TTGGCCGAGG ACTACGGCTT CGCGCTGCTG TTTCCCGAGC AACGGCGGGC AAACAATCCA AACCTCTGCT TCAATTGGTT TAACCCGGAG GACATAAGCC GCGATCACGG CGAGGTATTT TCCATTCGCC AGATGATCGC AAAGGTCGTT GCGGAACACG GTATCGACGG CAGGCGCGTG TTCGTGACCG GGCTTTCGGC CGGCGGCGCC ATGGCCGCAG CCATGCTCGC CACCTATCCC GAGATTTTTG CGGGCGGCGC GATCATCGCG GGCCTGCCAT ATGCAAGTGC CGGGACCATT CCCGAGGCAT TCGACCGAAT GCGCGGTCAC GGCAGCCCAA CTGCCAAGGA GCTTGAACTG CGATTGAGAA ACGCTTCAGG GCACAAAGGC CCATGGCCGA CATTATCGCT CTGGCAGGGG AGCGCAGACA GAACCGTCGT GCCATCCAAT GCAAATGCGA TCGTGGAGCA ATGGAGAAAT ATCCACGGCG TCGACGCATC GCCGGGGCGC GTCGCAGATA TCGGACGACA CCAGCGAAAG GTCTGGACCG ATGCTCACGG TGTCGATGTA ATCGAGCTGT ATACGATTGC CGGGATGGAT CACGGCACGC CGCTCGATGT CGACACCGGC TACGGCGCAA GCGGCCCCTT CATGCTTGAC GTCGGAATTT CATCGACCGT CGAAACTGCC AGGTCCTGGG GTCTGGTCCC CTCATTTGAA AAACGGCGCG ACGCAAAACC CTCGGCTGCG CAACCGGAAA ACGCCGCAGG CCCATTCGGC GCGGGCAGCG ACCGGGGCGG CATCCAGAAG GTCATTGAAG ATGCCCTCCG GTCCGCTGGG CTGATGCGGT AG
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Protein sequence | MRSMSDTLAR LAALRGTLRA QPTQNNPDLV ALDAFGSNPG ALGGYTYLPS KRGKNLALVV VLHGCTQTAA GYDSGSGWSR LAEDYGFALL FPEQRRANNP NLCFNWFNPE DISRDHGEVF SIRQMIAKVV AEHGIDGRRV FVTGLSAGGA MAAAMLATYP EIFAGGAIIA GLPYASAGTI PEAFDRMRGH GSPTAKELEL RLRNASGHKG PWPTLSLWQG SADRTVVPSN ANAIVEQWRN IHGVDASPGR VADIGRHQRK VWTDAHGVDV IELYTIAGMD HGTPLDVDTG YGASGPFMLD VGISSTVETA RSWGLVPSFE KRRDAKPSAA QPENAAGPFG AGSDRGGIQK VIEDALRSAG LMR
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