Gene Rleg_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1658 
Symbol 
ID8012727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1649880 
End bp1650971 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content62% 
IMG OID644824243 
Productesterase, PHB depolymerase family 
Protein accessionYP_002975484 
Protein GI241204388 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.044626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.200304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCTA TGTCGGACAC GCTCGCACGC CTTGCTGCGC TGCGAGGAAC CCTTCGCGCC 
CAACCCACGC AGAACAACCC CGACCTGGTC GCCTTGGATG CGTTTGGCTC AAACCCCGGC
GCCTTGGGGG GCTACACCTA TTTGCCGTCG AAGCGGGGGA AAAACCTAGC CCTGGTCGTC
GTCCTGCACG GCTGCACCCA GACTGCCGCC GGGTATGATA GCGGGTCCGG GTGGTCGCGA
TTGGCCGAGG ACTACGGCTT CGCGCTGCTG TTTCCCGAGC AACGGCGGGC AAACAATCCA
AACCTCTGCT TCAATTGGTT TAACCCGGAG GACATAAGCC GCGATCACGG CGAGGTATTT
TCCATTCGCC AGATGATCGC AAAGGTCGTT GCGGAACACG GTATCGACGG CAGGCGCGTG
TTCGTGACCG GGCTTTCGGC CGGCGGCGCC ATGGCCGCAG CCATGCTCGC CACCTATCCC
GAGATTTTTG CGGGCGGCGC GATCATCGCG GGCCTGCCAT ATGCAAGTGC CGGGACCATT
CCCGAGGCAT TCGACCGAAT GCGCGGTCAC GGCAGCCCAA CTGCCAAGGA GCTTGAACTG
CGATTGAGAA ACGCTTCAGG GCACAAAGGC CCATGGCCGA CATTATCGCT CTGGCAGGGG
AGCGCAGACA GAACCGTCGT GCCATCCAAT GCAAATGCGA TCGTGGAGCA ATGGAGAAAT
ATCCACGGCG TCGACGCATC GCCGGGGCGC GTCGCAGATA TCGGACGACA CCAGCGAAAG
GTCTGGACCG ATGCTCACGG TGTCGATGTA ATCGAGCTGT ATACGATTGC CGGGATGGAT
CACGGCACGC CGCTCGATGT CGACACCGGC TACGGCGCAA GCGGCCCCTT CATGCTTGAC
GTCGGAATTT CATCGACCGT CGAAACTGCC AGGTCCTGGG GTCTGGTCCC CTCATTTGAA
AAACGGCGCG ACGCAAAACC CTCGGCTGCG CAACCGGAAA ACGCCGCAGG CCCATTCGGC
GCGGGCAGCG ACCGGGGCGG CATCCAGAAG GTCATTGAAG ATGCCCTCCG GTCCGCTGGG
CTGATGCGGT AG
 
Protein sequence
MRSMSDTLAR LAALRGTLRA QPTQNNPDLV ALDAFGSNPG ALGGYTYLPS KRGKNLALVV 
VLHGCTQTAA GYDSGSGWSR LAEDYGFALL FPEQRRANNP NLCFNWFNPE DISRDHGEVF
SIRQMIAKVV AEHGIDGRRV FVTGLSAGGA MAAAMLATYP EIFAGGAIIA GLPYASAGTI
PEAFDRMRGH GSPTAKELEL RLRNASGHKG PWPTLSLWQG SADRTVVPSN ANAIVEQWRN
IHGVDASPGR VADIGRHQRK VWTDAHGVDV IELYTIAGMD HGTPLDVDTG YGASGPFMLD
VGISSTVETA RSWGLVPSFE KRRDAKPSAA QPENAAGPFG AGSDRGGIQK VIEDALRSAG
LMR