Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1646 |
Symbol | |
ID | 8012715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1638681 |
End bp | 1639739 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644824231 |
Product | ABC transporter related |
Protein accession | YP_002975472 |
Protein GI | 241204376 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.324172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGTAT CCCTCACCAT CGATTCCATC TCCGCCCATT ACGGCAGCAC GCAGGTGCTC AAAGACCTGT CGATCTCAAT CATGGCCGGG GAACTGGTCT CCCTGCTCGG CTCCAGCGGC TGCGGCAAGA CGACGACATT GCGCCTCGTG GCCGGCTTTC TGCAGCCGAG CAGCGGCAGC ATCAAGCTCG GCGAGCGCGA CCTGACCGGC CTCCCCGCAC ATGCGCGCGA CATCGGCCTG GTCTTTCAGA ACTACGCGCT TTTTCCTCAC CTGAGCGTGC AGGACAATGT CGCCTTCGGC CTGAGGCAGC GTCGTATTCC CCTGCCGGAA CGGACGAAAA GAACGATGGC CATGCTGGAG CGTGTCGGAC TTGCCGCCCT CGCCGACCGC CTGCCGTCGG CTCTGTCAGG CGGCCAGAAA CAGCGTGTGG CTCTCGCCCG GGCCCTGGTC ATCGAGCCGC CGCTTCTGAT GTTCGACGAG CCGCTTTCCA ATCTGGATGC AAAGCTCAGG ATCGACATGC GCGTCGAGAT CAGGCAGCTC CAGCGCGCCA ACGGCACGAC CTCGCTTTAC GTCACCCATG ACCAGGAGGA GGCATTCTCG ATCTCCGACA GGGTTGCGAT CATGAATGCG GGGCGCATCA TGCAGCTTGA CGCACCGGAG GTGCTGTATC GCCAGCCGGC CAACGCTTTC GTCGCCCGCT TCGTCGGCTT CGAGAACCTG ATCGGCATGA AGGTGACCGC GCGCAACGGC GCGCTTGTGA CCGCCGAAAC AACCGGCGGC GCGCGGCTGC AGCTGTCTCA GGAAACATTC GGGCCAATCA AGGACGACTT CATACTGGCC TGCCGTGCAG ACGGTCTTGC CGTCAGCCGT GACGGTGATG GCATCGCGGC CGTGCTCGGC ACGCGCACCT ATCTCGGCCG GGCCTATCAG TACAAATGCA TGACATCAGC AGGAGAGATC ACCGCCAATG GCGCGCTGTC CGACCCGCTG GAAACGGGCG CGTCCGCCGT GTTGACACCC GTGGCCGAGC AATGCTGCAT TCTCGACCCG GAAGATTGA
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Protein sequence | MTVSLTIDSI SAHYGSTQVL KDLSISIMAG ELVSLLGSSG CGKTTTLRLV AGFLQPSSGS IKLGERDLTG LPAHARDIGL VFQNYALFPH LSVQDNVAFG LRQRRIPLPE RTKRTMAMLE RVGLAALADR LPSALSGGQK QRVALARALV IEPPLLMFDE PLSNLDAKLR IDMRVEIRQL QRANGTTSLY VTHDQEEAFS ISDRVAIMNA GRIMQLDAPE VLYRQPANAF VARFVGFENL IGMKVTARNG ALVTAETTGG ARLQLSQETF GPIKDDFILA CRADGLAVSR DGDGIAAVLG TRTYLGRAYQ YKCMTSAGEI TANGALSDPL ETGASAVLTP VAEQCCILDP ED
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