Gene Rleg_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1646 
Symbol 
ID8012715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1638681 
End bp1639739 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content63% 
IMG OID644824231 
ProductABC transporter related 
Protein accessionYP_002975472 
Protein GI241204376 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.324172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGTAT CCCTCACCAT CGATTCCATC TCCGCCCATT ACGGCAGCAC GCAGGTGCTC 
AAAGACCTGT CGATCTCAAT CATGGCCGGG GAACTGGTCT CCCTGCTCGG CTCCAGCGGC
TGCGGCAAGA CGACGACATT GCGCCTCGTG GCCGGCTTTC TGCAGCCGAG CAGCGGCAGC
ATCAAGCTCG GCGAGCGCGA CCTGACCGGC CTCCCCGCAC ATGCGCGCGA CATCGGCCTG
GTCTTTCAGA ACTACGCGCT TTTTCCTCAC CTGAGCGTGC AGGACAATGT CGCCTTCGGC
CTGAGGCAGC GTCGTATTCC CCTGCCGGAA CGGACGAAAA GAACGATGGC CATGCTGGAG
CGTGTCGGAC TTGCCGCCCT CGCCGACCGC CTGCCGTCGG CTCTGTCAGG CGGCCAGAAA
CAGCGTGTGG CTCTCGCCCG GGCCCTGGTC ATCGAGCCGC CGCTTCTGAT GTTCGACGAG
CCGCTTTCCA ATCTGGATGC AAAGCTCAGG ATCGACATGC GCGTCGAGAT CAGGCAGCTC
CAGCGCGCCA ACGGCACGAC CTCGCTTTAC GTCACCCATG ACCAGGAGGA GGCATTCTCG
ATCTCCGACA GGGTTGCGAT CATGAATGCG GGGCGCATCA TGCAGCTTGA CGCACCGGAG
GTGCTGTATC GCCAGCCGGC CAACGCTTTC GTCGCCCGCT TCGTCGGCTT CGAGAACCTG
ATCGGCATGA AGGTGACCGC GCGCAACGGC GCGCTTGTGA CCGCCGAAAC AACCGGCGGC
GCGCGGCTGC AGCTGTCTCA GGAAACATTC GGGCCAATCA AGGACGACTT CATACTGGCC
TGCCGTGCAG ACGGTCTTGC CGTCAGCCGT GACGGTGATG GCATCGCGGC CGTGCTCGGC
ACGCGCACCT ATCTCGGCCG GGCCTATCAG TACAAATGCA TGACATCAGC AGGAGAGATC
ACCGCCAATG GCGCGCTGTC CGACCCGCTG GAAACGGGCG CGTCCGCCGT GTTGACACCC
GTGGCCGAGC AATGCTGCAT TCTCGACCCG GAAGATTGA
 
Protein sequence
MTVSLTIDSI SAHYGSTQVL KDLSISIMAG ELVSLLGSSG CGKTTTLRLV AGFLQPSSGS 
IKLGERDLTG LPAHARDIGL VFQNYALFPH LSVQDNVAFG LRQRRIPLPE RTKRTMAMLE
RVGLAALADR LPSALSGGQK QRVALARALV IEPPLLMFDE PLSNLDAKLR IDMRVEIRQL
QRANGTTSLY VTHDQEEAFS ISDRVAIMNA GRIMQLDAPE VLYRQPANAF VARFVGFENL
IGMKVTARNG ALVTAETTGG ARLQLSQETF GPIKDDFILA CRADGLAVSR DGDGIAAVLG
TRTYLGRAYQ YKCMTSAGEI TANGALSDPL ETGASAVLTP VAEQCCILDP ED