| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1638 |
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| Symbol | |
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| ID | 8012709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1629792 |
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| End bp | 1630790 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644824224 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_002975465 |
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| Protein GI | 241204369 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.503152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0466092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATT TCAACCGACG CAATTTCCTG AAGACCGCAG CTCTCGCCGG AACGGCGCTT
GCAGCGCCCG CCTTCGTCCG CACGGCCGCC GCCCGCACGA CGACGATCAC GATCGCCTCG
CTGCTCGGTG ACGACAAGCC GGAAACGAAG ATCTGGGTGA AGATCGGCGA ACTGGTCGAA
GCGAAACTCC CCGGCCAGTT CAAGTTCAAT ATCGTCAGGA ACGGCGCGCT CGGCGGCGAG
AAGGAAGTGG CCGAAGGCGT GCGCCTCGGC TCCATCCAGG CCAGCCTCTC GACGGTCTCG
TCGCTCTCCG GCTGGGCGCC GGAACTGCAG ATCCTCGATC TGCCCTTTCT CTTCCGCGAT
GCCGACCATG TTCGCAGGAC CGTCGCCGGT GATGTCGGCG CCGATCTCAA GCAGAAACTG
CAGGCGCAGA ATTTCGTCGT CGGCGATTTC ATCAATTACG GCGCCCGCCA TCTCCTGACC
AAGGAGCCGG TGACGCGGCC AGAACAACTC AAGGGCAAGC GCATTCGCGT CATCCAGAGC
CCTCTGCACA CCAAGCTCTG GAGCGCATTC GGCACGACGC CGATCGGCAT TCCGATCACC
GAGACCTATA ATGCGCTCGC AACCGGCGTC GCCGACGCGA TGGATCTGAC CAAGTCGGCC
TATGCCGGCT TCAAGCTCTA CGAGGTCGTG CCCGATATGA CCGAGACCGG CCACATCTGG
GCATCCGGCG TCATCTATTA TGCCTCGACC TTCTGGGCCG GCCTCAATGA CGAGCAGAAG
GCGGTGTTCC AGCAGGCCTC CAGCGAGGGG GCTGCCTATT TCAACCAGTT GATCGTCGAT
GACGAATCCA AATCCGTCGA GACGGCGCTT GCCAACGGCG GAAAACTCTT GAAGCCGGAA
GCCTTCGACG AATGGCAGAA GGGCGCCCAG GGGGTGTGGG ACGATTTCGC GCCGGTTGTC
GGCGGCATCG ACAGGATCAA ATCGATCCAG GCCGCCTGA
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| Protein sequence | MDNFNRRNFL KTAALAGTAL AAPAFVRTAA ARTTTITIAS LLGDDKPETK IWVKIGELVE
AKLPGQFKFN IVRNGALGGE KEVAEGVRLG SIQASLSTVS SLSGWAPELQ ILDLPFLFRD
ADHVRRTVAG DVGADLKQKL QAQNFVVGDF INYGARHLLT KEPVTRPEQL KGKRIRVIQS
PLHTKLWSAF GTTPIGIPIT ETYNALATGV ADAMDLTKSA YAGFKLYEVV PDMTETGHIW
ASGVIYYAST FWAGLNDEQK AVFQQASSEG AAYFNQLIVD DESKSVETAL ANGGKLLKPE
AFDEWQKGAQ GVWDDFAPVV GGIDRIKSIQ AA
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