| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1637 |
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| Symbol | |
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| ID | 8012708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1627946 |
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| End bp | 1629778 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644824223 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002975464 |
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| Protein GI | 241204368 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0560775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCACCA GTGAATTTCA TCCGATCGAA CAAACCGCTC CGGATAGCGG GGTGGCAGCG
CGCCTGCTGC GGGCGATCGA GGCGATTCTC GGCATTGCCG CGGCAGTCGT TCTGGCCGTG
CTGCTCGTGA TGGTGCTCGT CACCGTCTGC CTGCGCTATT TCTTCAGCGC CGGCTTCATC
GGTGCCGAGG ATCTCGGCAT CTGGCTGCAT GTGGGCCTGA TCGCGCTCGG CGCGCCGCTC
GGCCTCAACA GCGCGCTTGC CATGCGCCTC GACGTCTTCG TCAAGATGCT GCCGGAAAAC
CTGCAGAAGG TCACGCCGAT CGGCGCCGAC GTCTTCACCG TGCTTTCGGC GCTGATCCTG
AGCTTCGGCG GCAGCGAGAT CATGACGATG CTTGGCGGCG TCTCGCCGAC GCTCGGCGTG
CCGGAATGGA TCCGCTTCGG CTTCCTCGGC GCTGGCGGCG CACTGATCCT CGTCGTGCTG
CTTCTGCAGC GCATCGCCGA AGGCAAGATC CTGCCGGTTG TGATCTCGCT TGCCGTCGGT
GTCGCGCTCT ATGCCGGCAT CCCGCATGTC TCGCTCGATC TCGACTGGCC GCCGAGCATC
TTCCTGGGGT TGATCGCCGC GGTCGGCCTC GTGCTTGCTG CGCCGCTGCC GCACGCCTTT
CTTGCCGCGG CCTATGTCGT CATCGCCTTC GGCAGCAGCC TGCCGGAGCC GGCGATCGTC
TCCGCGACGG TCACCGGCGT CTCGAAATTC CTGCTGCTCG CCATTCCCTT CTTCCTGCTC
GCTGGCGGTC TTCTCACGGC TTCCGGCGTC GCCAACCAGC TCGTGCGCTT CGCCGCCGCA
ATGGTCGGAC ATCGCCGGGC CGGGCTGGCG CAGACGACAC TGTTGACCAG CGTCCTCTTT
TCCGGCGCTT CCGGCTCGTC GGTTGCAAAT GCCGCCTTCG GCGCCTCGAC CTTCCAGCCC
GAGCTGGTCA AACACGGCTA TCGGCCGGCG CAGGCGGCGG CGATCATCGC CTCGACATCG
GTTCTCGACA ATGTCATCCC GCCGTCGATC GCATTTCTCA TCCTTGCGAC CGCGACCAAT
CTCTCCGTCG GTTCGCTGCT CGTCGGCGGC TTCTTTGCCG GCGGCTTGAT GGCCATATGC
CTGGCGGTCG CAATCCATCT GACGGTCAGC GAACAGGTGC CCTTGCCGCG CGCAAATGCG
AGACAGCGCT GGCAATCGGC GGTCCAGGCA ATCCCGGCTT TCGGGCTCGG CGTCATCGTC
GTCGTTGGCA TCCGCATCGG TATCGTCACG ACCACGGAAG CAGCCGCTCT TGCTGCTTTC
TACACGCTGC TGCTCGGCAT CGGCGCGCGC CTCGGCATTC TCTCGCTCTA TGCCGCCTTC
CGTCAGGCAG CAGTCGAAGC GGCGGCGATC GGCCTTCTCA TCGGCACGGC CGGCCCCTTT
GCCTTTTTGC TGGCGGTCGA CGACGTGTCC GGACTGATCT CGCACCTGAC GACAGTGCTC
GGCGGCAGCG CGCTTACGGT CATCCTGCTG TCGAATGTCA TCCTGCTGGT CGTCGGCCTC
GTTCTCGATA TCGGCGCCGC GATCCTACTC TTCGGCCCGA TCCTGCTGCC GGCAGCGGTC
GCCGCCGGTA TCGATCCCAT CCAGTTCGGG GTGATCATCG TCGTCAACCT GATGATCCAC
GGACTCACAC CGCCGCTCGG CATGCTGATC TTCGTCGTCA GCGGCGTCAC GCGCATTCCC
GCCTCAGAGC TCTTTCGGGC GGTGGTTCCC TATCTGCTCG CTCTCCTGGT CTCGCTCGCA
ATCCTCTGCG CATGGGCCAT CATCTTCTCG TAA
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| Protein sequence | MATSEFHPIE QTAPDSGVAA RLLRAIEAIL GIAAAVVLAV LLVMVLVTVC LRYFFSAGFI
GAEDLGIWLH VGLIALGAPL GLNSALAMRL DVFVKMLPEN LQKVTPIGAD VFTVLSALIL
SFGGSEIMTM LGGVSPTLGV PEWIRFGFLG AGGALILVVL LLQRIAEGKI LPVVISLAVG
VALYAGIPHV SLDLDWPPSI FLGLIAAVGL VLAAPLPHAF LAAAYVVIAF GSSLPEPAIV
SATVTGVSKF LLLAIPFFLL AGGLLTASGV ANQLVRFAAA MVGHRRAGLA QTTLLTSVLF
SGASGSSVAN AAFGASTFQP ELVKHGYRPA QAAAIIASTS VLDNVIPPSI AFLILATATN
LSVGSLLVGG FFAGGLMAIC LAVAIHLTVS EQVPLPRANA RQRWQSAVQA IPAFGLGVIV
VVGIRIGIVT TTEAAALAAF YTLLLGIGAR LGILSLYAAF RQAAVEAAAI GLLIGTAGPF
AFLLAVDDVS GLISHLTTVL GGSALTVILL SNVILLVVGL VLDIGAAILL FGPILLPAAV
AAGIDPIQFG VIIVVNLMIH GLTPPLGMLI FVVSGVTRIP ASELFRAVVP YLLALLVSLA
ILCAWAIIFS
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