| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1618 |
|---|
| Symbol | |
|---|
| ID | 8012690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1606938 |
|---|
| End bp | 1607582 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644824204 |
|---|
| Product | anti-ECFsigma factor, ChrR |
|---|
| Protein accession | YP_002975445 |
|---|
| Protein GI | 241204349 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3806] Anti-sigma factor |
|---|
| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.61386 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCACG AGCAGATCGA CACGATCGAT GCATTGATGG CGCATTATGT TGCCGGCTCC
TTGCCCGAGC CGGCGCGTGT GTTGGTGCAG TCTCATCTCG AAATGAAACC GGATAATCGC
AGCCTGGTGA ACAGCCTCGA GCTGCTGGCC GGCGAAGCTC TGGAAAACGC GCCTGAAGTC
GCCATTGCCG ATCGCGACGG GCGGCTTGCG GCGATCTTTT CCTCTGCGTC TCCCGTCACG
GCGCCGCAGA CGGCCGCGCG GCCGGAGAAC GCGCTGTTTC CCCAAGCGTT GCGCAATCTC
TTGGGCTTCG AGGCCGAGGA CGTTCGCTGG CGTCGGCGGT TGCCCGGTTT CAGGGAATAT
TCGCTCGACA TGGACGGCTG CGAGGTCAGC CTGATGTGGA TCCGGCCGGG CCGAGCCTTG
CCGGCGCACA CCCACAAAGG CATGGAACTG ATCCTCATTC TCGACGGCGC CTTCAACGAT
GAACGCGGCC GTTTCGGTCC CGGCGACATC TCCATTGCCG ACGAGACGGT CGACCACCGG
CCGGTAGCCG AAAAGGACAG GCCTTGCATC GCCTTTGCCG TCTCGGATGG ACCGGTCAAG
CTCACCGGAT CCTTTCGTCA GATGATCGGC GACTTGATCG GCTGA
|
|---|
| Protein sequence | MVHEQIDTID ALMAHYVAGS LPEPARVLVQ SHLEMKPDNR SLVNSLELLA GEALENAPEV
AIADRDGRLA AIFSSASPVT APQTAARPEN ALFPQALRNL LGFEAEDVRW RRRLPGFREY
SLDMDGCEVS LMWIRPGRAL PAHTHKGMEL ILILDGAFND ERGRFGPGDI SIADETVDHR
PVAEKDRPCI AFAVSDGPVK LTGSFRQMIG DLIG
|
|---|
| |