Gene Rleg_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1608 
Symbol 
ID8012681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1598644 
End bp1599525 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content60% 
IMG OID644824194 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002975435 
Protein GI241204339 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.646472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA AGACCCAAGG CTATATCTTC GTTCTGCTGG CGCTCACCAT CTTTTCACTG 
CAGGACGCCA TCTCGAAACA TCTGGCGACG GCCTATCCGC CGATCTTCGT GACGATGATC
CGCTATTGGG CCTTTGCGCT TTTCACGATC ATCCTCGCGT CGAAGATGCG CGGCGGTATC
AAGGCGACGG CCCGCACCAA ACGCCCCTTC CTGCAGGTGA CGCGCGGCGT TCTGCTTGCA
GTTCAGGTGG TTCTGGCCAT CACCTGCTTT GCCGTGATCG GCCTTGCCCG TTCACAGGCG
ATCTTTTCCG CGACGCCGAT CCTGATCGCG CTGCTGGCGA TGCCGATCCT CGGCGAGCGG
GTCGGGTGGC GGCGGTGGGC AGCGATCGGC GCCGGACTGT TCGGAGTGCT GCTGATCCTG
AAGCCGGAAG GCGAATTTTT CGACCTTAAG CTGCTTCTCG CCGTCCTTTC CTGCTTCAAC
TTCGCCTTCT ACGTTATCGC CACCCGCTTG GTCAGCCGCG ACGATTCGTC GATGACCAGC
TTCTTCTATA CCGGCGTCGT CGGTGGCGTT ACGATGACGC TGGTCGGACC GTTCTACTGG
AGCTGGATGT CGCCGGGCGA TTGGGGCTGG ATGGCGCTCG TCTGCGTCAC CAGCATTTCC
AGCCATTATT TCCTGATCCG CGCCTATGAT ATTCTCGATG CCGCCGCCGT CCAGCCGCTG
ACCTATCTGT CACTTGTCTA CGCCTCTGTC ATCGGCATGG TGATCTACGA TGAAACGCTC
AGTCTCAATA TGATCGCTGG CTCGATCATC GTGGTTGCCG CCGGGATCTT CACGGTCTGG
CGCGAACATG TGGTGGGACG CAGGGCCGCT GCTGCCAATT GA
 
Protein sequence
MTSKTQGYIF VLLALTIFSL QDAISKHLAT AYPPIFVTMI RYWAFALFTI ILASKMRGGI 
KATARTKRPF LQVTRGVLLA VQVVLAITCF AVIGLARSQA IFSATPILIA LLAMPILGER
VGWRRWAAIG AGLFGVLLIL KPEGEFFDLK LLLAVLSCFN FAFYVIATRL VSRDDSSMTS
FFYTGVVGGV TMTLVGPFYW SWMSPGDWGW MALVCVTSIS SHYFLIRAYD ILDAAAVQPL
TYLSLVYASV IGMVIYDETL SLNMIAGSII VVAAGIFTVW REHVVGRRAA AAN