Gene Rleg_1599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1599 
Symbol 
ID8012674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1589881 
End bp1591152 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content61% 
IMG OID644824185 
Productdiguanylate cyclase 
Protein accessionYP_002975426 
Protein GI241204330 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGA CACTCAACCT CCTTCTCTTC GTCGTCGAAG CCATCGCCTA TTTCGTGCTG 
ATGGTGACGC TTCTGCATTT CCGTCACCGG CTCGGTCTCG GGGTTTTCCT GACGGCGCTC
GGCGTCATGC ATTTCATGGA GACCTATCTG GCGGCGGTGT TTTATGTTTC GCTGCCGTTC
GGGGATGTGT CGCCGGGCTC ATCCGTCTTC TTCTCCGGCA AGCTGATGAT GATCCTGATG
CTTTACCTGC AGGAGGATGC CGCGACGGTG CGCCAGCCGA TCTACGGTCT CTTCCTCGGC
AACCTGCTCA CCGTCGGTAT TGCCTGGGTG CTGCAACTGC ATCAGCCGCT GCAGATATCG
ACCAACCTCA CACCCGACGT CGATTTCCTC AAGGAGATGG GCTGGCTGAT GGTCTGGGGC
ACGGCGCTGC TCTATGTCGA TTCGCTCGGC ATCATCCTGC TTTACGAAAA ACTCGGCGAT
TTCTTCCGCC GCCGGGTCGT CCTGCGTTTC CTGATTTCGG GGTTCGCGCT GTTGACCTTC
GACCAGATCG GCTTCTTCGC CGCGCTGCAT TACTTCCTGG ATGTGCCGAT CGCCGCATTC
TGGGGCGGAT GGAAGGCAAA AATGCTTGCC GTCTGCCTCT ACGCGGCGAT GTTCGCATTC
TATGAGTATC GTATTCGCCG TGTCGGTGCG GGCGGGTCCG CACGCTCCAT CAGCGACGTG
TTCGGCGACC TGACGTTCCG CGAGCGCTAT AACGACCTTC TGGAGCGCAC CGGCCGCGAC
ATGCTCACCG GCGTTTACGA TCGGACGCGC ATGGAGGTTG AAGCGCCGCT GATGCTGCGT
GAGGCGCTGA GGCAGGGGCT ATACGCCACC GTTCTTATTC TCGACGCCGA TCACTTCAAG
GATGTCAATG ACGGCTACGG CCATCTCCAG GGCGACGAGG TGCTGAAGGC GATCGCCGCC
CGATTGGGCA CGACGTTGCG CTCGAGCGAT CGCGTCTTCC GCTTCGGCGG CGAGGAATTC
GTTGCCGTCT GTCCAGGCGC TGACCACGAG GAAGGTCTGC TGCTTGCCGA GCGCCTGCGC
TGGACGATTG CAACCAGCGT CAAGACGCCG GATGACAGGC CGATCACGGT CAGCATCGGT
GTTGCGACTG CCGACGAGGA CGGCGTCGAT TTCACCGCCG TGCTGACGGC TGCCGACGGC
AGGCTCTATG TGGCCAAGAA GAGCGGCCGC AACTGTGTCG TCGGCCGCTC CGGCGTGGTG
AAACTCAGTT AG
 
Protein sequence
MMETLNLLLF VVEAIAYFVL MVTLLHFRHR LGLGVFLTAL GVMHFMETYL AAVFYVSLPF 
GDVSPGSSVF FSGKLMMILM LYLQEDAATV RQPIYGLFLG NLLTVGIAWV LQLHQPLQIS
TNLTPDVDFL KEMGWLMVWG TALLYVDSLG IILLYEKLGD FFRRRVVLRF LISGFALLTF
DQIGFFAALH YFLDVPIAAF WGGWKAKMLA VCLYAAMFAF YEYRIRRVGA GGSARSISDV
FGDLTFRERY NDLLERTGRD MLTGVYDRTR MEVEAPLMLR EALRQGLYAT VLILDADHFK
DVNDGYGHLQ GDEVLKAIAA RLGTTLRSSD RVFRFGGEEF VAVCPGADHE EGLLLAERLR
WTIATSVKTP DDRPITVSIG VATADEDGVD FTAVLTAADG RLYVAKKSGR NCVVGRSGVV
KLS