Gene Rleg_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1563 
Symbol 
ID8012641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1542891 
End bp1548359 
Gene Length5469 bp 
Protein Length1822 aa 
Translation table11 
GC content59% 
IMG OID644824149 
Productmulti-sensor signal transduction multi-kinase 
Protein accessionYP_002975391 
Protein GI241204295 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0557891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGT CTCGATACCA GCCGCAGATG CTTTGGGAAG GCGATGTCCT CGCGCTCTAT 
CGCGGCTGGT CGCCGGAAAG AACCACGTCC GTCCTTCTGG TCACTCCGGT ATCGGCGAAT
GACGCCGGAG AAGGCCTCCA TCGTCTTGAA CATGAACTTG CCCTCGCGGA AAAACTCGAG
GCGCCCTGGG CAGCGAAGCC TTTGGCGCTC GAGCGTCACG ACGGGCGGCC GTTTCTTGTG
CTGTCGGACG AGGGCGGGAC GCCTCTGAGC AAGCTGCTCG GGAGGCCTTT CGAAACCGAG
CGGTCCCTGG TTATCGCGAC TAATGCGGCC GCAGCACTTC GAAAGGCTCA CGCTCTCGAC
CTCGTCCACA AGGATTTGAG GCCGGACAAT TTGCTCGTCG ACCCTTCCGG AAGAGTATGG
TTGACGGGAT TCGGCAAGGC TGGTCCGGCG AGGCCCGAGG ACCAGCCGGT TGGTCCCGCG
ATCGCCGCCG CTGATCTCGC CTATATCTCG CCTGAACAGA CCGGGCGGGT GAAGCGAGCG
GTCGACGCCC GCAGCGATCT TTATTCCCTC GGCGTCGTCT TCTATCAAGT CCTGACCGGG
GAATTGCCGT TCGTCGCCAC TGACGCGATG GAGTGGATTC ATGCCCACGT CGCCCGGCAG
CCGATCCCAG CCGGTCAACG GCACGAAGAC GTTCCGCCTA CACTTGAGAC CATCGCGCAG
AAGCTTCTGG CCAAGAAGCC GGAGGAGCGA TACCAGACCG CTGCAGGCCT CGAAGCCGAC
CTGAAGCGTT GCTTGGACAG TTGGCGTCAG AGCGGATGCA TTCAACAGTT CGACATCGCG
ACAATCGATG CGGGCGAGCG GTTACGCGTG CCTGAAGGGC TCTACGGTCG CTCCCGTCAG
AACGACGCCA TCGCGGGCGC ATTCGAGCGA GTGCAATCTT CGGGCAGGGC GGAAGTCGTG
CTGGTCTCCG GTCCTGCGGG AGTCGGCAAA TCCTCCGTCG TGCACGAATT GCGGAAGAAG
CGCTTTCAGC AGGCGGGCCT CTTCGCCTCA GGGAAGTTCG ATCAATACAC GCGCGACATT
CCGTATGCGA CGATAGCGCA AGCCTTCAGG GGGCTTGTGC GGCAGATCCT AGGCTCTGGG
GACGCAGATC TCGCACATTG GCGAAGGGCG CTCATCGATG CCCTCGGTCC TAACGGACAG
CTCATGGTGA ATCTCGTCCC GGAACTCTCG CTCGTTATTG GCGAACAGCT CCCGGCGCCC
GATCTTCCAC CGCAGGATGC GAAGGCTCGC TTCCATCTGA TCTTCCGCCG ATTTCTGAAT
GTCTTCGCCC GACCGAACAT GCCACTGGTT CTGTTCATCG ACGACGTACA GTGGCTGGAC
ACGGCTACGA TAGAGCTTCT TGAGCGGATC ACGGTTGAAC CAGACGTCAC CGATCTTCTC
CTCATCTGCG CATACAGAGA CGACGAGGTT TCTCGGGAAC ATCCATTTAC CGCCACGCGA
GAGGCGATGC TAAACGCCCC GATCCACGTG CAGGAAGAAC ATCTTTCACC GCTCACAGTG
AAGGATCTGG AGCAACTCCT GGCGGACGCG CTCCAGTCCG AAAGAGAGCT GGTCGCGCCG
TTGGCGAAGC TGGTTTTCGA CAAGACCGAG GGCAATCCCT TCTTCGTACT TCAGTTCCTG
ACGACAATGG ACGAGGAGAG GCTCGTTACC TTCGACGCCG TTCAGGGAAC TTGGATATGG
GAACCGGATC GCATCAGGAC GAAAGGTATC ACGGACAACG TCGCCGAGCT GGTGTCATCG
AAGCTCTTGC GGCTCCCCCG AGTGACATTA GAGACGGTCA AACTGCTCGC CTGTCTTGGC
AATGGTGCAT CGTTGTCAAC GTTGGGCATC GTGGGTGGAG AGTCCAATCA GCAAGTTGCC
GCGATCCTGT GGGAAGCGAT ACAGGCTAGG TTCGTACTGC GTGTGGACGA CGCCTTCGTT
TTTGCTCATG ATCGGATACA GGAGGCGGCC TACCTCCTCG TTCCGCAACA TGAGCGTCCG
GCGATCCATC TTCGGATTGG CCGAGCTCTC ATGTCAAAGA TGACGCCGAC CGATCTTCGG
GATCGCGTCT TCGAAGTCAC CGATCAGATC GGGCGAGGTC TCGGTCTGAT CACCTCGGAC
GTAGAGCGCG CACAAGTCGC CGAACTGTTT CTCGACGCAG GCGCTCGCGC GAAGACGTCC
GCGGCATACC CCTCGGCGCT CCGATATTTC ACGACTGGCT TGAGCCTGCT TGACCACGGA
CATTGGGAGC GGCGCTACGA CCTGATGTTT TCTTTGGCCC TTCAGAAGGC CGAATGCGAA
TTCCTGACTG GCGAGCATGG AGTGGCGGAA ACACATCTGG TGGACCTGAT TACCCGCGCC
GCATCCCGTG TCGATGGGGC CGCTGTCGTC CGTCTGCTTT CATCTCTTTA CGTTGCACTC
GGCGAGCAGA CCAAAGCCGT CGATGTCGGG TTGGAGTTTC TAAGAGAGAT GGGGATCGAA
TGGTCCGCAC ACCCGTCGGA AGAGGACCTC CGGTCGGAAA TTGAAGCGAT GAGCGAATTG
CTCGCAGGGC GCGACATCGC GCTGCTTGTG GATTTGCCGC GTATGGCCGA CCCGGACTGG
CTCGCGGCAA TGGACGTCCT TGCCTACATG ATCCTGCCGG CGCTCCTGAC CGACAGCAAT
CTCGAAGATC TGATCTACAC CCAGATGGTC AACCTGAGCC TTAGATACGG CAACTGCGAT
GCTTCCTGCT ATGCCTATGC TTCGTTCATT GTTCCTCTCG GCCTCCGCTT CGGGGACTAT
GCATTAGGTC GTCAGTTCGG CGACCTGGGG CTAGCCCTCG TCGACGAATA CGGACTGGAT
CGCTTCAAGG CTCGCGTCTA CACATGTTAT TCTTGCTACG TCGTTCCATG GGCCCGACAC
CTTCCTGAAT CGATATTGCT CACACGGCGC GCCATCGAAG TCGGTATCGC CGCCGGTGAC
CTCGTTTACG CTGCCACGAC CGCCAAGAGC CTGGTGTCCA ACCTCCTCGT TTCCGGCGAG
CCTCTACAGG TTGTCGAAAA CGAAGGAATG CAGTTCCTCG CGATGGCAAA CAAGGCTGGA
TTTGGCCTCG CGGCGGATTC CGCCATCGGG CAGCTATTGC TGATCCGCGA ACTCGAGGGG
AGAGCCGGTC CGGAGAAGAA CGATCTGCCC GACAGATCGT CGTTCCTCCA GCACTTGCAG
GAGGCTGGTG CGTCGCTTGT CCTCCCCTTG GCGTGGTATT GGATCCAGGA GATGCAGGCC
CGGTTTCTCG AAGAAGATTA TGCCGCTGCA GTCGAGGCCG AATACGAAGC TCGTAAAATT
GTCGGTGCGA CGCGATCTTT TATCGATCTC GGCGAATACC ACTTCTATTC CGCGCTCGCC
CACGCCGGGG CATGCGCTTC TGCCAGCGAC GAAAAGCGGC AGCTCCACTT GCAGTCGATC
CGAGCACACC TGACACAGAT CGAGGCGTGG GCAGAGAGCT GCCCCGAGAA CTTCAGCAAT
CGCCGCAGCC TTGTCGCGGC CGAAATTGCT CGCCTCGAAA GTCGCGATTT CGAAGCCCTC
GAGCTTTACG AGGAAGCTGT GCGATCGGCC AGGCGATATG GCTTCATCCA GAACGAAGCG
CTTTCGAACG AACTTGCCGC CCGCCACTGC GCCTCTCGAG GGCTGACGAT GAGCGCGGAT
GCCTTCCTTC GGAGTGCGAG GGCCTGTTAC GCAAAATGGG GAGCGCACGG TAAGGTGCGT
CAAATCGATC GATCGAACTC CGATTGGGGA ATCGAGAGTG AGCAGAGGCA ACCCTCAACG
GGAGCGCCAG TAAACTATCT GGACATGGCG GCAGTGATGG AGATGTCGCA AGCAGTTTCA
GGCGAAATTG TTCTTGATCG CCTCATCGAG CGTCTGATGA TCACCGTCGT GGAGCATTCG
GGTGCCGTCC GAGGGCTGTT GCTGCTTTCC CAAGATGGAA AGATGCAAGT CGTTGCGGAG
GCGGTCACCG ATCAAAGTGG GATTTCCGTG TTCTTGTCCA AGTCGGGCGG GGTTGCGTTT
CCCGACACAG TCGTCAGCTA CGTCAGCCAC ACCCGAGAGG TGGTCATTCT CGACGACGCG
CAGCAGGCAG ACCTGTTTTC CGGCGATGCC TACTTCCAGC AATTCGGATC GACATCCGTG
CTTTGCCTTC CGTTGGTGAA ACAACAGCAG CTCGTCGGGA TCCTGTATCT CGAAAACAGC
CTGTCATCCC ATCTGTTCAC CGAGGGCCAG GTCGCAGTTC TACGTCTTCT TGCGTCTCAA
GCGGCGATCT CTCTCGAAAA CGCCGCGTTA TATCGCGAGG CGCAGGAAAC CCATGAACGG
GCACGTCGCG CGGCCGAGGA GCTTCGTGTC TCGTACGACA TGATCCCGGC CCAGGCGTGG
AACACGGAGC CGGACGGTCT CTATCCTGCA TTCAACAAGC AGTGGCACGA CTACACGGGA
ATCTCGCCCG AGAGCGCGCG CACCGGCGGA TGGGTAGATT CATATCACCC TGAAGACAGG
GAAAAAGTTC TCCGGAAATG GACTGAGCTC CTTCAGACCG GAACCGCCGG CGAGATAGAG
GCGCGAATCG TACGACATGA CGGGGTTTCG CGGGTCTTCC TTGTGCGGGG ATCGCCTATG
CGAGACGAAA GGGGAGCAAT TCTGAAGTGG TTCGGCACGC ACACGGACAT TGACGATCTT
AAGCGGATCG AGGAGGCGCA GGAACTACTC GCACGCGCCG GCCGGCTCAC GGCCTTGGGT
GAGCTGACGG CGTCGATCGC ACACGAGGTC AATCAGCCTT TGATGGCCAT TGTCACCAAT
GCGGCGACGT GTCTGCGGTG GCTAAGTGAC GACCTGCTTG ACGTGCGGGA GGCCCGTGAG
GCCGCGGAAC GGATCATCCG CGACGGCCAT CGTGCTGGAG ATGTCATCAC GAGTATTCGC
GCAATGGCTA GGAAGTCGCC TTTGGCGATG GAAGACGTCG ACGTCAACGC AATGGTCGAA
GACGTGCTCG TCCTGACACG AGGCGAGCTT CAACGTCACG GGATCACGCT CCAGAAGGAG
TTGGCCGCGG ATGTCGGCTC GGCGGTCGGA GACCGGATCC AGTTGCAGCA GGTCGTCCTT
AATCTGATCC TCAATGCGGT CGAAGCGATA GGATCCTCCG AGAGGGGATC ACGGGGTCTG
CAAGTCACCT CGGAGAGGTC GGACGACGGA AAGGTCCTGG TCACCGTTGC CGACAGCGGA
CCCGGCATCG ACGTAGCGAA ATTAGATCAG ATATTTGAAG CGTTCTTCAC AACGAAGACC
GGTGGTCTCG GGATGGGATT GTCGATATGC CGTTCGATCG TCGAGGCGCA TGGAGGACGG
CTCTGGGTGT CGCCGAATGA CCCGGACGGA AGCGTGTTCT CGTTCACTCT AAGGGCGGCG
GCACCTTAA
 
Protein sequence
MDMSRYQPQM LWEGDVLALY RGWSPERTTS VLLVTPVSAN DAGEGLHRLE HELALAEKLE 
APWAAKPLAL ERHDGRPFLV LSDEGGTPLS KLLGRPFETE RSLVIATNAA AALRKAHALD
LVHKDLRPDN LLVDPSGRVW LTGFGKAGPA RPEDQPVGPA IAAADLAYIS PEQTGRVKRA
VDARSDLYSL GVVFYQVLTG ELPFVATDAM EWIHAHVARQ PIPAGQRHED VPPTLETIAQ
KLLAKKPEER YQTAAGLEAD LKRCLDSWRQ SGCIQQFDIA TIDAGERLRV PEGLYGRSRQ
NDAIAGAFER VQSSGRAEVV LVSGPAGVGK SSVVHELRKK RFQQAGLFAS GKFDQYTRDI
PYATIAQAFR GLVRQILGSG DADLAHWRRA LIDALGPNGQ LMVNLVPELS LVIGEQLPAP
DLPPQDAKAR FHLIFRRFLN VFARPNMPLV LFIDDVQWLD TATIELLERI TVEPDVTDLL
LICAYRDDEV SREHPFTATR EAMLNAPIHV QEEHLSPLTV KDLEQLLADA LQSERELVAP
LAKLVFDKTE GNPFFVLQFL TTMDEERLVT FDAVQGTWIW EPDRIRTKGI TDNVAELVSS
KLLRLPRVTL ETVKLLACLG NGASLSTLGI VGGESNQQVA AILWEAIQAR FVLRVDDAFV
FAHDRIQEAA YLLVPQHERP AIHLRIGRAL MSKMTPTDLR DRVFEVTDQI GRGLGLITSD
VERAQVAELF LDAGARAKTS AAYPSALRYF TTGLSLLDHG HWERRYDLMF SLALQKAECE
FLTGEHGVAE THLVDLITRA ASRVDGAAVV RLLSSLYVAL GEQTKAVDVG LEFLREMGIE
WSAHPSEEDL RSEIEAMSEL LAGRDIALLV DLPRMADPDW LAAMDVLAYM ILPALLTDSN
LEDLIYTQMV NLSLRYGNCD ASCYAYASFI VPLGLRFGDY ALGRQFGDLG LALVDEYGLD
RFKARVYTCY SCYVVPWARH LPESILLTRR AIEVGIAAGD LVYAATTAKS LVSNLLVSGE
PLQVVENEGM QFLAMANKAG FGLAADSAIG QLLLIRELEG RAGPEKNDLP DRSSFLQHLQ
EAGASLVLPL AWYWIQEMQA RFLEEDYAAA VEAEYEARKI VGATRSFIDL GEYHFYSALA
HAGACASASD EKRQLHLQSI RAHLTQIEAW AESCPENFSN RRSLVAAEIA RLESRDFEAL
ELYEEAVRSA RRYGFIQNEA LSNELAARHC ASRGLTMSAD AFLRSARACY AKWGAHGKVR
QIDRSNSDWG IESEQRQPST GAPVNYLDMA AVMEMSQAVS GEIVLDRLIE RLMITVVEHS
GAVRGLLLLS QDGKMQVVAE AVTDQSGISV FLSKSGGVAF PDTVVSYVSH TREVVILDDA
QQADLFSGDA YFQQFGSTSV LCLPLVKQQQ LVGILYLENS LSSHLFTEGQ VAVLRLLASQ
AAISLENAAL YREAQETHER ARRAAEELRV SYDMIPAQAW NTEPDGLYPA FNKQWHDYTG
ISPESARTGG WVDSYHPEDR EKVLRKWTEL LQTGTAGEIE ARIVRHDGVS RVFLVRGSPM
RDERGAILKW FGTHTDIDDL KRIEEAQELL ARAGRLTALG ELTASIAHEV NQPLMAIVTN
AATCLRWLSD DLLDVREARE AAERIIRDGH RAGDVITSIR AMARKSPLAM EDVDVNAMVE
DVLVLTRGEL QRHGITLQKE LAADVGSAVG DRIQLQQVVL NLILNAVEAI GSSERGSRGL
QVTSERSDDG KVLVTVADSG PGIDVAKLDQ IFEAFFTTKT GGLGMGLSIC RSIVEAHGGR
LWVSPNDPDG SVFSFTLRAA AP