Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1556 |
Symbol | |
ID | 8012635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1534846 |
End bp | 1536306 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644824142 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_002975384 |
Protein GI | 241204288 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.388564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00312965 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCGGA AAATGGCAGC GCTGGTGATT GGGGTGGCAG ACTACTCCGA GGGAAACAAG CTCGCCAATC CCGTTCACGA TGCTGTTGAC CTAGGCGACA AATTGAGGGG TTACGGGTTC GAGGTCATCG TCGTAACTGA CTGCACGAAA AGGGATATGG ACAAGCAGTT AAAGGAGTTC CGTACGCTGC TAGAAACCCA CGACGTGGGG CTGTTCTTCT TTGCGGGCCA TGGAATGCAA ATCGATGGGA CCAACTTCCT TCTTGCCACC GATACCGAAA TGGACACGGA GTTGGACGCA AAGCACACGT CCCTTTCGCT CGACAGAGTG GTGGACGTCA TGGCGAAGTC GGCAGCGTCC ACTAAGATCA TCGTACTCGA TGCATGTCGG AATAACCCCT GGGAGCGCGC TTGGCATCGT GGCCCAGCAC TTAGGGGGCT TGCTTCGGTT TACGCGCCGA AGGGAACTAT AATTGGCTTT GCGACATCTC CCGGAGAGGT TGCGTTGGAT GGCGCGGGCC GCAACGGGAC ATACACCGAA GCATTACTCG AGCATATCGA CACTCCTGAT AGCTCCATCG AGACCATGTT CAAGCGCGTA CGCAATACAG TTGCGGCATC GAGTGGAGGT CGGCAGACCA CGTGGGAACA CACCTCGCTA TCCGGAGAGT TCTATTTTAA CCTGAGTTTG GGTAACTTGG TTGATGAATA CGATGGCACC GCGCTTGCGG ACAGCCTCTT CGTCCTCGAT CCTGGCCGGA AATCGCACAA CATCATTGCC GGACTGAAGA CATATAACTG GTATAAACAG AACCCAGCAC TAGATCGGCT CGACGCCGCC TCTGCAAACA AAATGTCGAA AGACAACTTG TTCGTCCTCG GGCGGAATAT CTACCAGGCG GCCTGCGGAT CAGCGGGCTC CGCAATCACG TTCATCGACA ATTTCATGGA TAAGACACGC GGATTCAATC GGGAAGCAAG GAAGTCACTT CTGGACGGCA TCTTGTTCGA AGTCTTCTTC GACTCCCAAG CGCATATGCG GGACAAAATG AAAAGACGGT ATTTTAACGA GGTTTTCGAG TTGCAGCGCT TCGCCGACCT GAAGCAAAGT TTCGATTTCA TTGCAGAAGT GCTGACCACG GCCGCTGGCA AGTTCTATGC CTTGCCTGGC AAGGGACACG ATCTGGCTGT AAGCGTTTCC ACGAAGAGCG AGGATGGCAT GATCATCGTG GACGCAGTGT ATGTCGGAGG TGTGGACGTG CTTCGGCGAG AAGACGATAA TGATGCCGAT GAACACGACC CACCTCGTTA TTGGAGGCTG AGCCCACAGG AAATAAAGGA GAGACTTAGC GAAGAGCTTG TCGTACCTAC ACGCTTGTTG AAGTTGACTT TCACTCCTGG TGCCGCTGTA AAGGAAGAGG AATTGGGGTT CCCAATGGGT TGGACTGTCA GGCAAACATG A
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Protein sequence | MNRKMAALVI GVADYSEGNK LANPVHDAVD LGDKLRGYGF EVIVVTDCTK RDMDKQLKEF RTLLETHDVG LFFFAGHGMQ IDGTNFLLAT DTEMDTELDA KHTSLSLDRV VDVMAKSAAS TKIIVLDACR NNPWERAWHR GPALRGLASV YAPKGTIIGF ATSPGEVALD GAGRNGTYTE ALLEHIDTPD SSIETMFKRV RNTVAASSGG RQTTWEHTSL SGEFYFNLSL GNLVDEYDGT ALADSLFVLD PGRKSHNIIA GLKTYNWYKQ NPALDRLDAA SANKMSKDNL FVLGRNIYQA ACGSAGSAIT FIDNFMDKTR GFNREARKSL LDGILFEVFF DSQAHMRDKM KRRYFNEVFE LQRFADLKQS FDFIAEVLTT AAGKFYALPG KGHDLAVSVS TKSEDGMIIV DAVYVGGVDV LRREDDNDAD EHDPPRYWRL SPQEIKERLS EELVVPTRLL KLTFTPGAAV KEEELGFPMG WTVRQT
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