Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1549 |
Symbol | |
ID | 8012630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1528342 |
End bp | 1529292 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644824135 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002975377 |
Protein GI | 241204281 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0143415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00302933 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGACCG ATATCGACAT CAAGGTGAGC TTGGGCAGGA TACGTGACGT CCTCGAAACC ATCGACGACT GCCTGCACGT CGAGCACTAC AGCGTCGCCG ACCCGAACAT CTCACTTGCA AAGCTGACAC GCGAGAGCGG AAATCGGGCG ATCACCACCT CGCTGGGTTC CGGCGTCGGG ACGTTCGTCG TTGCGGCCCG CGATTCCGAG CTGCGCCTTG AGCAAAAGGG GCGTGTCCTG TTTCGGGGAC TGATGGTCGA GGACAGCGTC ACCTTCATTG AAGGCCCCGA CCCCGTCGCC GTCGAGCTGC AGTCCGACGC CTGTCTCTAT GTCCTCACTT TTCTACGAGA GCCTCACAGG GGGCAAAGCC CCGTTGTGGG AGGACGATTC AACATCCGCG ACATCCGCCT CGCGGAGCTG ATCGGTGAGA TCTCAGAAAG TTCGCCCGAG CGACGATGCG AACTCACCCG AGACTTCTCG CGGCGGGCGT TCGAACACTA TCGATCGCTG CCACGCGTTC ATCCCCTCTC GGCATGGCGG CTCAGTCGCG TCAGACGATA TGCGGAATCC CGTCTCGATC AGCGGATGTC GCTGGAGGAA CTGGCGGACG TCGCAGGGTT CTCGCGGGCG CATTTCGCGG CAACGTTCAA GGCGGCCACC TCGATGAGCG CCCATGAATT CCTTCTGCGG ATACGAATTC AGGCCGCAGC CAGGCTGCTG ACTTGCACCG ATCTTGCCCT CGTCGAAATC GCCCTGCAGA CGGGGTTCCA GAACCAGCCG CATTTTACGA CGGTCTTCAA GAAGATCACG GCGATCACGC CGCGAAAATG GCGGGATTCT CGTCGGTCCA CGGCAATGGC GCACAGCCTC AAGCAAGTGG TCGACGGTGC CATCGTCATC GAACATCTGC CGGGAAAGCC GGAAGGATTC CTTCCGCACG ATCTGCATTG A
|
Protein sequence | MQTDIDIKVS LGRIRDVLET IDDCLHVEHY SVADPNISLA KLTRESGNRA ITTSLGSGVG TFVVAARDSE LRLEQKGRVL FRGLMVEDSV TFIEGPDPVA VELQSDACLY VLTFLREPHR GQSPVVGGRF NIRDIRLAEL IGEISESSPE RRCELTRDFS RRAFEHYRSL PRVHPLSAWR LSRVRRYAES RLDQRMSLEE LADVAGFSRA HFAATFKAAT SMSAHEFLLR IRIQAAARLL TCTDLALVEI ALQTGFQNQP HFTTVFKKIT AITPRKWRDS RRSTAMAHSL KQVVDGAIVI EHLPGKPEGF LPHDLH
|
| |