| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1519 |
|---|
| Symbol | |
|---|
| ID | 8015571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 1505458 |
|---|
| End bp | 1507782 |
|---|
| Gene Length | 2325 bp |
|---|
| Protein Length | 774 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644824106 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_002975348 |
|---|
| Protein GI | 241204252 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.263526 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCG CGGCTAGAAG AGACTACACG CAGTTCGGCT TAAACAGGGA CGACCGTATC
TATTTCGACA AACGACACTG GTGTTTGAAA ACCCGTAGTG CCGAACGTGA AACGGAGGAA
GAGTCCGCCA TGTGGGAGGC GGGCTACATT CTCGAAACCG TCGACGGCAA GTCGGAGCGC
CGTGTAGAAG CGCTCACGTT CCAGGACGTC GACAAGCTCT TCAGCGCTAG CAAGATCGAC
TGCGAGCGGG GTTACTTCAG TAGCCGTAAC GCCATCGACA GGAGGATGAA GTCGCCCAAG
ATCTTCGATC TTCCGGCGGC GACGATTCTG CGAGCCCGCA TGGTTTCGGA GTTCCTCGAG
CTGGAACTGG ACAGGTACGA CACAGGAGAA TTCTTCACGC GGTCCGACGC CGGCTACGCC
AAGTTCATCA AAGCGTTCAG AGCCGAGAAC GAATACCTCA TTCCACCGAA GACGGGGAAG
CGCGAGGTCG TCCCAGGACC GAGGCAGTTC GGCCGGCTGG TCGAACGGTT CGAAAACAAC
CTCTTCGAAC CGGGATCGCT GCTCCCCCGA CACCGCGGCG GCGTCGGGCA CAAATCTCGC
TTTACGCCCG ACGAAGTCAA ATTTCACGCC GAGCACGCGC AGAAGTATCA GTCCACGGAC
CGCCCGACCA AGCTCGACTG CTACGCCCAG ATGGCAGAGG CGAACGAAAA TCGAAAGGCC
GTTGGCGAGC AGGAGCATCA GGTCCCTTCC CTCAGGACCT TCCAGAGGTT GATCGACGAA
CTCGGAGATT ATCGTAACGA ACTGACCAGG GCTGGCGATC CCAGCCGGGT GACCAGGAAG
TTCGGCATGT CCCGGAACGG TTATCAGCCA ATGCGTCCGC TGGAATACAT CGAGATGGAC
GAGCACAAGC TCGACGTCAT CCGCCTGCTC GTGAAGAACG GCATCTGGGA ATATCTTCAC
CCCGACGTTC AAAGACGGAT CGAGGAGAAG ATCGGGGAGA CTAACGACGG TCGCGTCTGG
CTGTCGGTCG CACTTGACGC CTATTCGCGG TCCGTTTGCG GGGCCAAGCT GCTGTGGAGT
GCTCCTGACG GGGCGTCCGC AGTTGCGACG CTTGCAATGG TCGCGCGTCC CAAGGACTAC
GAGACCAAGC TCTACGGCAC CATGACCAAA TGGCCGCAGG GTGGCACGGC TGAATACATC
CACGTCGATG CAGGCGCGAG CTACACGTCG CTTGAGTTTC AACACGCCGC CTACTCCTAC
ACTGGCAACG TCGCCGTGAC GCCCTCGAAG CATCCGCATC TTCGCGGCCG CGTCGAACGC
TTCTTCCGGA CGATCAACCA ACGCTATATC CATCTGCTGT CGGGTCAGAC CTTCAGCAAC
GTCCTTCTCC GTGACCGATA CGACGCCCAG AAGTACCGGC ACATGACCGA CGATCAACTT
GCCGAATTTT TGGTCATGCT AATCGTCGAC TGCTACCACA ATACCAAGCA CCGTGGGCTC
TACGGCTTGA CACCACTTCA GGCCTGGTAT TTCGGAACGC AGTTTGGCAA CGGGACCGTG
CGCGGCTACC CCGGCGAGAG GGAATACGCC GAGGCCTTCA GCGTTGTCTC CCGATACAAG
GTTGGCAACG ACGGCATCAA GATCCTAGGC CTGCCGTATT CGAACCTCTG GCTCCAGCAG
CAGCGCGAAC GGCGGTACGA TCTCGAGGTG ATCGTCCGAT TCAACGAGAT CGACGTCTCG
CGCATCCAGG TGAAGGATCC CTTCTCCGAC GACTGGATGG AGGTTCCCTG CATCCTCGAC
GGCGTCAAAG GCTTAAGAGT TTTCGACTGG CTGGAACAGC TTAAGTATAT GCGTCGAAAG
TTCGGTCCTT CCGCGAAAAT CAGCGCGAAG GTTGCGCAGG CCGCGCTCGC GGGCGCCCGC
GCCTTCGCAA ACGCAAGCAA GTCAGCGGCA GGCATCGGCT CGCCGATCAC GACCCGCTCC
ATGCTCGACT ACTGGGACCA GCAGATGGTC GGAAGCTTCA CCATCGCACG CGAGGCGGCG
ACGGACTACG GCGACCTTGA AGCCTTCGAG GCATTCGACA CCACTCCGCG GCCCGATCCG
TTCGCGCCAT CGCATCCTCG GGCCGGCCAG TCCACGACGT CTGGAGACAA CGTGGACGCC
GGTCCGGCCG GGGCGGGCGA CCATGGGCCA GAGAGTTCGA CTTCCAAGCA CCGCGCGGCA
CCAGAGCCCA AATCAGCTCC AGCGAGGACG TCGCAAGTCG AAGAGCCCCT TCCGCAGCGC
CCCCGTTCAA TCCGCATCGA GAAAATCCGG AAGGACGACA AGTGA
|
|---|
| Protein sequence | MSAAARRDYT QFGLNRDDRI YFDKRHWCLK TRSAERETEE ESAMWEAGYI LETVDGKSER
RVEALTFQDV DKLFSASKID CERGYFSSRN AIDRRMKSPK IFDLPAATIL RARMVSEFLE
LELDRYDTGE FFTRSDAGYA KFIKAFRAEN EYLIPPKTGK REVVPGPRQF GRLVERFENN
LFEPGSLLPR HRGGVGHKSR FTPDEVKFHA EHAQKYQSTD RPTKLDCYAQ MAEANENRKA
VGEQEHQVPS LRTFQRLIDE LGDYRNELTR AGDPSRVTRK FGMSRNGYQP MRPLEYIEMD
EHKLDVIRLL VKNGIWEYLH PDVQRRIEEK IGETNDGRVW LSVALDAYSR SVCGAKLLWS
APDGASAVAT LAMVARPKDY ETKLYGTMTK WPQGGTAEYI HVDAGASYTS LEFQHAAYSY
TGNVAVTPSK HPHLRGRVER FFRTINQRYI HLLSGQTFSN VLLRDRYDAQ KYRHMTDDQL
AEFLVMLIVD CYHNTKHRGL YGLTPLQAWY FGTQFGNGTV RGYPGEREYA EAFSVVSRYK
VGNDGIKILG LPYSNLWLQQ QRERRYDLEV IVRFNEIDVS RIQVKDPFSD DWMEVPCILD
GVKGLRVFDW LEQLKYMRRK FGPSAKISAK VAQAALAGAR AFANASKSAA GIGSPITTRS
MLDYWDQQMV GSFTIAREAA TDYGDLEAFE AFDTTPRPDP FAPSHPRAGQ STTSGDNVDA
GPAGAGDHGP ESSTSKHRAA PEPKSAPART SQVEEPLPQR PRSIRIEKIR KDDK
|
|---|
| |