| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1477 |
|---|
| Symbol | |
|---|
| ID | 8012563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 1460819 |
|---|
| End bp | 1462354 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644824066 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002975308 |
|---|
| Protein GI | 241204212 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.635572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCAC ACTCGTTTGA ATCCATTCTG GAGAGCCTGC CTCAGGGCAT TGTTCTGCTT
GATCCTGCCG GTACCGTGAC GGCATTCAAT TCACGCACGC TTGATATTCT CGGTCTTCCG
CAAGGCGCCA TTCGCAAAGG CATGAATATC CACGGATTGC CGGGCGCTGC AGACTGCCGT
TCAGTGGCAT CCCGGCGGTC GACGGCCGGT GGACCGCCGA CGTCTCAGTT TGCCCTTTCC
GACGGAGGAA TGGTGTCACT GACCTGCGCC CCATCGCGGG ATGGAGGCTG GATCCTCAGT
TACGAAGACA TCTCGACTCT CATTCGTGTC GAAGACAGTC TGACCGAACA ACATCGCCGG
TTCGACGCAG CGCTCAGCAA CATGCCGCAT GGGCTGTGCA TGTTCGATTC GACCAAGAAC
CTGATATTGT GCAACGCCTC CTACGCGCGG ATGTACAATC TGCCGGACCT GCTAACGCAA
CCGGGGACAC CACTTGTGGA TATCCTCGCC TATCGCAGCC GAGAGGGAAA TGGCCCGGCC
GATACCGCCG CCTATTTTGA CGTGGTCTTT GAAGCGACAG CACGCGGTGC GCCGGCCAGC
CAAAATATCG TTTTGGCAGA TGGACGCGTT ATCAAGATCA CCCACAATCC GATGCAAACG
GGTGGATACG TGGCCACGCA TGAGGACGTG ACAAAGACCG TGCGGCTTGC CGAAGAGCTG
CGCCGGCATC ACGATCAGCT CGAAGCGACG GTTAAGAGCC GCACGGCGGA AGTCGAGCGG
CAGGCGCGAG AACTCGAGCG AATGCTGGCG CAGGAGCGGA ACATCAACGA GCTGCAGCGG
CAATTCGTTG CGATGGCATC CCATGAATTC AGGACCCCAC TTGCAATCAT CGACGCTGCT
GCCCAGCGGC TGCTGCGAAA AAGGGGGGCG GTCGAGCCCG AATTTCTCAG CGACAAGGTC
GATCAAATCC GCGCATCGGT GACCCGGATT GTCGATCTCA TGGAGAGCAT CCTGTCAGCC
GGACGCCTTG ATACCGGCAA GATCGACATC AGCTACGACG CATGCGCATT GAGATCATTG
ATAAAAACCT GTTGCGAGCG GCAGTCGACG ATCGCAAAGT CGCACAGGCT TGTGTTGGAT
ATCGATGGGC TGCCGGAGTT CATCGACGCC GATCCCCGCA CTTTGGCGCA GGTCTTTACC
AACCTGCTTT CCAATGCCGT CAAGTACGCG CCCGGAACCT CCGAAATTCG CGTCACGGCA
TGGGCAGAAA CGGGGAACGT CAAAGTTTCG ATCAGCGATG ATGGGGTGGG GATCGATGCC
GAAGACGTGC CCCGGCTGTT CCAGCGTTAT TTTCGTGCCC GGACGTCGAC CGGGATTGCC
GGAACCGGTA TCGGCCTCAA CCTGGTTAAG CAGATCGTCG AACTGCATAA CGGCTCGATA
GAGGTTCGAA GCGCAAGAGG ATGCGGATCG ACGTTTATCG TAACCCTTCC CATCAAGAGA
AGTGGTAACG CTTCCGCGAC CAATGACGCT GCCTGA
|
|---|
| Protein sequence | MMSHSFESIL ESLPQGIVLL DPAGTVTAFN SRTLDILGLP QGAIRKGMNI HGLPGAADCR
SVASRRSTAG GPPTSQFALS DGGMVSLTCA PSRDGGWILS YEDISTLIRV EDSLTEQHRR
FDAALSNMPH GLCMFDSTKN LILCNASYAR MYNLPDLLTQ PGTPLVDILA YRSREGNGPA
DTAAYFDVVF EATARGAPAS QNIVLADGRV IKITHNPMQT GGYVATHEDV TKTVRLAEEL
RRHHDQLEAT VKSRTAEVER QARELERMLA QERNINELQR QFVAMASHEF RTPLAIIDAA
AQRLLRKRGA VEPEFLSDKV DQIRASVTRI VDLMESILSA GRLDTGKIDI SYDACALRSL
IKTCCERQST IAKSHRLVLD IDGLPEFIDA DPRTLAQVFT NLLSNAVKYA PGTSEIRVTA
WAETGNVKVS ISDDGVGIDA EDVPRLFQRY FRARTSTGIA GTGIGLNLVK QIVELHNGSI
EVRSARGCGS TFIVTLPIKR SGNASATNDA A
|
|---|
| |