Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1476 |
Symbol | |
ID | 8012562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1460138 |
End bp | 1460755 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644824065 |
Product | Carboxymuconolactone decarboxylase |
Protein accession | YP_002975307 |
Protein GI | 241204211 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain [TIGR01926] uncharacterized peroxidase-related enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.399629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTTCA TTCACACCCC CAATGCATCC GCCAGCGAGA AGACGACGTC GATGTATGCG TCGGCCGAGG CGAACTATGG TTATCTGCCG AACATGTATC GGGCCTTCGG CCATCGGCCG GAGGTGATGG AGAGCTGGGC AGCGCTGCTT TCGAGCATTC GCGGCCATAT GAGCTTGCGG CGCTACGAGC TGGTGACGCT GGCGGCGGCC AAGGAGCTCA AATCCTCCTA TTGCATGCTG GCGCACGGCT CAGTGCTGCT GCGCGAGGGT TTCACCAGCG ACGGGCTGAC GGCTGTTGTC AACGAGACGG ACAAGGCGCC GATCGATGCC GGCGAACGCG CGATCATGGC CTTTGCCGCC AAGGTGGCGC GCGATGCGAC GTCGGTGACC CAGCAGGACA TCGACGGGCT GAAGAAACAC GGGCTGAGCG ACGCCGATGT CTTCGACGTC ACGGCTGCTG CAGCGGCCCG GTGTTTCTTC TCGAAAATGT TGGATGCGCT GGGTGCTGCA CCCGACCATG CCTACATCGA GCGGCTGGAG CCGAATGTGC GAAAGACGCT CAGCGTCGGC CGAGAGGTCG AGCGGCCTCT GGCGCCGTCA CCGTCTCGCG CGCAATGA
|
Protein sequence | MAFIHTPNAS ASEKTTSMYA SAEANYGYLP NMYRAFGHRP EVMESWAALL SSIRGHMSLR RYELVTLAAA KELKSSYCML AHGSVLLREG FTSDGLTAVV NETDKAPIDA GERAIMAFAA KVARDATSVT QQDIDGLKKH GLSDADVFDV TAAAAARCFF SKMLDALGAA PDHAYIERLE PNVRKTLSVG REVERPLAPS PSRAQ
|
| |