Gene Rleg_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1476 
Symbol 
ID8012562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1460138 
End bp1460755 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content63% 
IMG OID644824065 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_002975307 
Protein GI241204211 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.399629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCA TTCACACCCC CAATGCATCC GCCAGCGAGA AGACGACGTC GATGTATGCG 
TCGGCCGAGG CGAACTATGG TTATCTGCCG AACATGTATC GGGCCTTCGG CCATCGGCCG
GAGGTGATGG AGAGCTGGGC AGCGCTGCTT TCGAGCATTC GCGGCCATAT GAGCTTGCGG
CGCTACGAGC TGGTGACGCT GGCGGCGGCC AAGGAGCTCA AATCCTCCTA TTGCATGCTG
GCGCACGGCT CAGTGCTGCT GCGCGAGGGT TTCACCAGCG ACGGGCTGAC GGCTGTTGTC
AACGAGACGG ACAAGGCGCC GATCGATGCC GGCGAACGCG CGATCATGGC CTTTGCCGCC
AAGGTGGCGC GCGATGCGAC GTCGGTGACC CAGCAGGACA TCGACGGGCT GAAGAAACAC
GGGCTGAGCG ACGCCGATGT CTTCGACGTC ACGGCTGCTG CAGCGGCCCG GTGTTTCTTC
TCGAAAATGT TGGATGCGCT GGGTGCTGCA CCCGACCATG CCTACATCGA GCGGCTGGAG
CCGAATGTGC GAAAGACGCT CAGCGTCGGC CGAGAGGTCG AGCGGCCTCT GGCGCCGTCA
CCGTCTCGCG CGCAATGA
 
Protein sequence
MAFIHTPNAS ASEKTTSMYA SAEANYGYLP NMYRAFGHRP EVMESWAALL SSIRGHMSLR 
RYELVTLAAA KELKSSYCML AHGSVLLREG FTSDGLTAVV NETDKAPIDA GERAIMAFAA
KVARDATSVT QQDIDGLKKH GLSDADVFDV TAAAAARCFF SKMLDALGAA PDHAYIERLE
PNVRKTLSVG REVERPLAPS PSRAQ