Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1428 |
Symbol | |
ID | 8012519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1427561 |
End bp | 1428736 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644824017 |
Product | elongation factor Tu |
Protein accession | YP_002975259 |
Protein GI | 241204163 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00224702 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00405593 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGAAAGA GTAAGTTTGA GCGCAACAAG CCGCACGTCA ACATTGGCAC GATTGGCCAC GTTGACCACG GTAAGACGTC TCTGACGGCA GCGATCACGA AGTACTTCGG TGAGTACAAG GCGTACGACC AGATCGACGC GGCTCCGGAA GAAAAGGCGC GTGGCATCAC GATTTCGACG GCTCACGTTG AATACGAGAC GCCGGCCCGC CACTATGCCC ACGTCGACTG CCCCGGCCAT GCCGACTACG TCAAGAACAT GATCACCGGT GCTGCCCAGA TGGACGGCGC GATCCTGGTG TGCTCGGCCG CTGACGGCCC GATGCCGCAG ACGCGCGAAC ACATCCTGCT GGCCCGCCAG GTCGGCGTTC CGGCAATCGT GGTGTTCCTG AACAAGGTCG ACCAGGTTGA CGACGCCGAG CTTCTCGAAC TGGTCGAGCT CGAAGTTCGC GAACTGCTGT CGTCCTACGA TTTCCCGGGC GACGATATCC CGATCGTCAA GGGTTCGGCA CTTGCTGCTC TCGAAGATTC GGACAAGAAG ATCGGCGAAG ATTCGATCCG CGAGCTGATG GCTGCTGTCG ACGCCTACAT CCCGACGCCT GAGCGTCCGA TCAACCTGCC GTTCCTGCTG CCGATCGAAG ACGTGTTCTC GATCTCGGGC CGCGGTACGG TTGTGACCGG CCGCGTCGAG CGTGGCATTG TCAAGGTTGG CGAAGAAGTC GAGATCGTCG GCATCCGCCC GACGACGAAG ACGACGGTGA CCGGCGTTGA AATGTTCCGC AAGCTGCTCG ATCAGGGCCA GGCTGGCGAC AACATCGGTG CGCTGATCCG CGGCGTTACC CGTGACGGCG TTGAGCGTGG CCAGATTCTG TGCAAGCCGG GTTCGGTCAA GCCGCACAAG AAGTTCATGG CTGAAGCCTA CATCCTGACG AAGGAAGAGG GTGGCCGTCA TACGCCGTTC TTCACCAACT ACCGTCCGCA GTTCTACTTC CGCACGACCG ACGTGACGGG CATTGTGACG CTGCCGGAAG GCACGGAGAT GGTCATGCCG GGCGACAACG TCACGGTATC GGTCGAGCTG ATCGTTCCGA TCGCGATGGA AGAAAAGCTG CGCTTCGCTA TCCGCGAAGG CGGCCGCACC GTCGGCGCCG GTATCGTCGC GTCGATCGTC GAGTAA
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Protein sequence | MGKSKFERNK PHVNIGTIGH VDHGKTSLTA AITKYFGEYK AYDQIDAAPE EKARGITIST AHVEYETPAR HYAHVDCPGH ADYVKNMITG AAQMDGAILV CSAADGPMPQ TREHILLARQ VGVPAIVVFL NKVDQVDDAE LLELVELEVR ELLSSYDFPG DDIPIVKGSA LAALEDSDKK IGEDSIRELM AAVDAYIPTP ERPINLPFLL PIEDVFSISG RGTVVTGRVE RGIVKVGEEV EIVGIRPTTK TTVTGVEMFR KLLDQGQAGD NIGALIRGVT RDGVERGQIL CKPGSVKPHK KFMAEAYILT KEEGGRHTPF FTNYRPQFYF RTTDVTGIVT LPEGTEMVMP GDNVTVSVEL IVPIAMEEKL RFAIREGGRT VGAGIVASIV E
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