Gene Rleg_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1428 
Symbol 
ID8012519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1427561 
End bp1428736 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content61% 
IMG OID644824017 
Productelongation factor Tu 
Protein accessionYP_002975259 
Protein GI241204163 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00224702 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00405593 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGAAAGA GTAAGTTTGA GCGCAACAAG CCGCACGTCA ACATTGGCAC GATTGGCCAC 
GTTGACCACG GTAAGACGTC TCTGACGGCA GCGATCACGA AGTACTTCGG TGAGTACAAG
GCGTACGACC AGATCGACGC GGCTCCGGAA GAAAAGGCGC GTGGCATCAC GATTTCGACG
GCTCACGTTG AATACGAGAC GCCGGCCCGC CACTATGCCC ACGTCGACTG CCCCGGCCAT
GCCGACTACG TCAAGAACAT GATCACCGGT GCTGCCCAGA TGGACGGCGC GATCCTGGTG
TGCTCGGCCG CTGACGGCCC GATGCCGCAG ACGCGCGAAC ACATCCTGCT GGCCCGCCAG
GTCGGCGTTC CGGCAATCGT GGTGTTCCTG AACAAGGTCG ACCAGGTTGA CGACGCCGAG
CTTCTCGAAC TGGTCGAGCT CGAAGTTCGC GAACTGCTGT CGTCCTACGA TTTCCCGGGC
GACGATATCC CGATCGTCAA GGGTTCGGCA CTTGCTGCTC TCGAAGATTC GGACAAGAAG
ATCGGCGAAG ATTCGATCCG CGAGCTGATG GCTGCTGTCG ACGCCTACAT CCCGACGCCT
GAGCGTCCGA TCAACCTGCC GTTCCTGCTG CCGATCGAAG ACGTGTTCTC GATCTCGGGC
CGCGGTACGG TTGTGACCGG CCGCGTCGAG CGTGGCATTG TCAAGGTTGG CGAAGAAGTC
GAGATCGTCG GCATCCGCCC GACGACGAAG ACGACGGTGA CCGGCGTTGA AATGTTCCGC
AAGCTGCTCG ATCAGGGCCA GGCTGGCGAC AACATCGGTG CGCTGATCCG CGGCGTTACC
CGTGACGGCG TTGAGCGTGG CCAGATTCTG TGCAAGCCGG GTTCGGTCAA GCCGCACAAG
AAGTTCATGG CTGAAGCCTA CATCCTGACG AAGGAAGAGG GTGGCCGTCA TACGCCGTTC
TTCACCAACT ACCGTCCGCA GTTCTACTTC CGCACGACCG ACGTGACGGG CATTGTGACG
CTGCCGGAAG GCACGGAGAT GGTCATGCCG GGCGACAACG TCACGGTATC GGTCGAGCTG
ATCGTTCCGA TCGCGATGGA AGAAAAGCTG CGCTTCGCTA TCCGCGAAGG CGGCCGCACC
GTCGGCGCCG GTATCGTCGC GTCGATCGTC GAGTAA
 
Protein sequence
MGKSKFERNK PHVNIGTIGH VDHGKTSLTA AITKYFGEYK AYDQIDAAPE EKARGITIST 
AHVEYETPAR HYAHVDCPGH ADYVKNMITG AAQMDGAILV CSAADGPMPQ TREHILLARQ
VGVPAIVVFL NKVDQVDDAE LLELVELEVR ELLSSYDFPG DDIPIVKGSA LAALEDSDKK
IGEDSIRELM AAVDAYIPTP ERPINLPFLL PIEDVFSISG RGTVVTGRVE RGIVKVGEEV
EIVGIRPTTK TTVTGVEMFR KLLDQGQAGD NIGALIRGVT RDGVERGQIL CKPGSVKPHK
KFMAEAYILT KEEGGRHTPF FTNYRPQFYF RTTDVTGIVT LPEGTEMVMP GDNVTVSVEL
IVPIAMEEKL RFAIREGGRT VGAGIVASIV E