Gene Rleg_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1392 
Symbol 
ID8012485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1381842 
End bp1383500 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content65% 
IMG OID644823977 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002975223 
Protein GI241204127 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00476541 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.125996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCG CCAACCGGAC TGATGACAAA CTCGCAGAAC TCAACCAGCC GAGCCTGTGG 
TCCGGCATCA ATGCCTATCG ATCTGATCCG TTGATCGTCG ATCTGACGGC GGCCCTGCCG
CGCGGCATCC GCGAAGACCT GGAAAACATG GGCCGCTACG TCACCTCGCC AGAGGCGCAG
GAGATGGCGC GCATGGCAAA CCAGGGCACG CCGCAGCTGC GCACTCATGG TCCACGCGGT
GAGCGCCTCG ACGTCGTCGA ATTCCATCCT GCCTGGCATG CGCTGATGCG GCGCTCGATG
TCGGTCGGCC TGCATTCCTC CGTCTGGGAT CCCCAGGCCG ATACCGATGC CAAGGACGAG
GCCCACAAGG TTCGCGCCGC GCGGTTTTAT CTGACGTCAC AGCTGGAATC CGGCCATCTC
TGCCCGCTGA CGATGACGAG CGCTTCCGTT GCGGCGCTCT CGGCTTCGCC CGCGGTCCAG
AAGGACTGGG CGCCCAAAAT TCTCTCGCGC AAATATGATT CGTCGAACAA GCCCGCCATG
CAAAAATCCG CCGTGACCAT CGGCATGGGC ATGACGGAAA AGCAGGGCGG CACGGATGTG
CGCGCCAACA GGAGCGCTGC CGAAAAGGTC AGCGAGGGCA TCTACCGGCT GTCCGGGCAC
AAGTGGTTCA TGTCGGCACC GATGAGCGAT GCTTTCATCA TGCTGGCGCA GACGAAGGAG
GGCATGGGCT GCTTCCTCGT GCCGCGCCTT CTGGAGGATG GTTCCGCCAA CGGGCTGCAA
TTCCAGCGGC TGAAGGACAA GGTCGGCAAC CGCTCCAACG CCTCCTCCGA GGTCGAGTTT
ACAGACACGT TCGGTTTTCT GCTCGGTGGT CCGGATGCCG GTATCCGCAC CATCCTCGAC
ATGGTGACGC TGACGCGGCT CGACTGCGCG CTGGCCTCGT CAGGCATGAT GCGCGCCTCG
CTCGCCGAAG CCGTGCACCA CACCCGCGGC CGCAGCGTCT TCGGCAAAAT GCTCGTCAAC
CAGCCGATCA TGACGCGCGT GCTCGCCGAC ATGGCGCTCG ATGTTGCCGC CGCGACGGCA
CTGTCCTTCC GTCTAGCCGA CGCCTTCGAC AAGGCGCGCG GCAACGCCGA GGACGCGGCC
TATGCCCGCG TCATGACGCC TGTCGCCAAA TACTGGTGCT GTAAGATCGC ACCGGCGCTG
ATCTACGAGG CGATGGAATG CATCGGCGGC AACGGCTACA TCGAAGAGCG TCCGATCGCC
CGCCATTACC GCGAGGCTCC GGTCAACGCC ATCTGGGAAG GCTCCGGCAA CGTCATGGCG
CTCGACGTGC TGCGCGTGCT GAACCGCGGC AAGGATCTGT TCGAAACGGT CTTCGCCGGC
CTTGCCCGCG ATCTCGGCCC TGCCGGCAAG AAGACGATCG ACGTGCTGCG CGCTGCAATC
GCGCTTTGCG AACAGGACGA GGGCGCCGCG CGCCTGCTCG TCGAGCAACT GGCGCTCGCC
GCCGGTGCAG CCGAACTCTA TCGCCTTGGG GCAGGGCGCA TTGCCGATGC CTTCATCGAG
ACGCGTCTTG CCGGCGGCTG GCGATCCACC TACGGCATGC TCGATTCCCG CTTCGACGCC
AGCTACATCG TCGACCTGCT CTATCCGCCA GCGGCCTGA
 
Protein sequence
MTSANRTDDK LAELNQPSLW SGINAYRSDP LIVDLTAALP RGIREDLENM GRYVTSPEAQ 
EMARMANQGT PQLRTHGPRG ERLDVVEFHP AWHALMRRSM SVGLHSSVWD PQADTDAKDE
AHKVRAARFY LTSQLESGHL CPLTMTSASV AALSASPAVQ KDWAPKILSR KYDSSNKPAM
QKSAVTIGMG MTEKQGGTDV RANRSAAEKV SEGIYRLSGH KWFMSAPMSD AFIMLAQTKE
GMGCFLVPRL LEDGSANGLQ FQRLKDKVGN RSNASSEVEF TDTFGFLLGG PDAGIRTILD
MVTLTRLDCA LASSGMMRAS LAEAVHHTRG RSVFGKMLVN QPIMTRVLAD MALDVAAATA
LSFRLADAFD KARGNAEDAA YARVMTPVAK YWCCKIAPAL IYEAMECIGG NGYIEERPIA
RHYREAPVNA IWEGSGNVMA LDVLRVLNRG KDLFETVFAG LARDLGPAGK KTIDVLRAAI
ALCEQDEGAA RLLVEQLALA AGAAELYRLG AGRIADAFIE TRLAGGWRST YGMLDSRFDA
SYIVDLLYPP AA