Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1392 |
Symbol | |
ID | 8012485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1381842 |
End bp | 1383500 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644823977 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_002975223 |
Protein GI | 241204127 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00476541 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.125996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCG CCAACCGGAC TGATGACAAA CTCGCAGAAC TCAACCAGCC GAGCCTGTGG TCCGGCATCA ATGCCTATCG ATCTGATCCG TTGATCGTCG ATCTGACGGC GGCCCTGCCG CGCGGCATCC GCGAAGACCT GGAAAACATG GGCCGCTACG TCACCTCGCC AGAGGCGCAG GAGATGGCGC GCATGGCAAA CCAGGGCACG CCGCAGCTGC GCACTCATGG TCCACGCGGT GAGCGCCTCG ACGTCGTCGA ATTCCATCCT GCCTGGCATG CGCTGATGCG GCGCTCGATG TCGGTCGGCC TGCATTCCTC CGTCTGGGAT CCCCAGGCCG ATACCGATGC CAAGGACGAG GCCCACAAGG TTCGCGCCGC GCGGTTTTAT CTGACGTCAC AGCTGGAATC CGGCCATCTC TGCCCGCTGA CGATGACGAG CGCTTCCGTT GCGGCGCTCT CGGCTTCGCC CGCGGTCCAG AAGGACTGGG CGCCCAAAAT TCTCTCGCGC AAATATGATT CGTCGAACAA GCCCGCCATG CAAAAATCCG CCGTGACCAT CGGCATGGGC ATGACGGAAA AGCAGGGCGG CACGGATGTG CGCGCCAACA GGAGCGCTGC CGAAAAGGTC AGCGAGGGCA TCTACCGGCT GTCCGGGCAC AAGTGGTTCA TGTCGGCACC GATGAGCGAT GCTTTCATCA TGCTGGCGCA GACGAAGGAG GGCATGGGCT GCTTCCTCGT GCCGCGCCTT CTGGAGGATG GTTCCGCCAA CGGGCTGCAA TTCCAGCGGC TGAAGGACAA GGTCGGCAAC CGCTCCAACG CCTCCTCCGA GGTCGAGTTT ACAGACACGT TCGGTTTTCT GCTCGGTGGT CCGGATGCCG GTATCCGCAC CATCCTCGAC ATGGTGACGC TGACGCGGCT CGACTGCGCG CTGGCCTCGT CAGGCATGAT GCGCGCCTCG CTCGCCGAAG CCGTGCACCA CACCCGCGGC CGCAGCGTCT TCGGCAAAAT GCTCGTCAAC CAGCCGATCA TGACGCGCGT GCTCGCCGAC ATGGCGCTCG ATGTTGCCGC CGCGACGGCA CTGTCCTTCC GTCTAGCCGA CGCCTTCGAC AAGGCGCGCG GCAACGCCGA GGACGCGGCC TATGCCCGCG TCATGACGCC TGTCGCCAAA TACTGGTGCT GTAAGATCGC ACCGGCGCTG ATCTACGAGG CGATGGAATG CATCGGCGGC AACGGCTACA TCGAAGAGCG TCCGATCGCC CGCCATTACC GCGAGGCTCC GGTCAACGCC ATCTGGGAAG GCTCCGGCAA CGTCATGGCG CTCGACGTGC TGCGCGTGCT GAACCGCGGC AAGGATCTGT TCGAAACGGT CTTCGCCGGC CTTGCCCGCG ATCTCGGCCC TGCCGGCAAG AAGACGATCG ACGTGCTGCG CGCTGCAATC GCGCTTTGCG AACAGGACGA GGGCGCCGCG CGCCTGCTCG TCGAGCAACT GGCGCTCGCC GCCGGTGCAG CCGAACTCTA TCGCCTTGGG GCAGGGCGCA TTGCCGATGC CTTCATCGAG ACGCGTCTTG CCGGCGGCTG GCGATCCACC TACGGCATGC TCGATTCCCG CTTCGACGCC AGCTACATCG TCGACCTGCT CTATCCGCCA GCGGCCTGA
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Protein sequence | MTSANRTDDK LAELNQPSLW SGINAYRSDP LIVDLTAALP RGIREDLENM GRYVTSPEAQ EMARMANQGT PQLRTHGPRG ERLDVVEFHP AWHALMRRSM SVGLHSSVWD PQADTDAKDE AHKVRAARFY LTSQLESGHL CPLTMTSASV AALSASPAVQ KDWAPKILSR KYDSSNKPAM QKSAVTIGMG MTEKQGGTDV RANRSAAEKV SEGIYRLSGH KWFMSAPMSD AFIMLAQTKE GMGCFLVPRL LEDGSANGLQ FQRLKDKVGN RSNASSEVEF TDTFGFLLGG PDAGIRTILD MVTLTRLDCA LASSGMMRAS LAEAVHHTRG RSVFGKMLVN QPIMTRVLAD MALDVAAATA LSFRLADAFD KARGNAEDAA YARVMTPVAK YWCCKIAPAL IYEAMECIGG NGYIEERPIA RHYREAPVNA IWEGSGNVMA LDVLRVLNRG KDLFETVFAG LARDLGPAGK KTIDVLRAAI ALCEQDEGAA RLLVEQLALA AGAAELYRLG AGRIADAFIE TRLAGGWRST YGMLDSRFDA SYIVDLLYPP AA
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