Gene Rleg_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1384 
Symbol 
ID8012477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1370285 
End bp1371469 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content61% 
IMG OID644823969 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002975215 
Protein GI241204119 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.381678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAC CGAGAACCGG CACACCGGGC GATGTCGAAG AAATCCATTG GCCTTCTCTG 
GTGGCAGCCA TCTCGTCCAT ATCCGCCGTC GGCATAGCAA TCGGCCTCGG TCTGCCCCTC
CTCAGCATCA TTCTCGAAAA ACGCGGCATC TCGTCCACCC TGATCGGGCT CAACACGGCG
ATGGCCGGGG TCGCGGCGAT GGCCGCCGCA CCTGTTACCA CCAGGCTTGC CCATAAATAC
GGCGTTGCGC CGACAATGCT CTGGGCCGTG CTGATTTCGG CGCTGAGCGC GCTCGGTTTC
TATTACGCCC AGGATTTCTG GATGTGGTTT CCGCTGCGTT TCGCATTTCA TGGCGCGACG
ACGACGCTGT TCATCCTCTC CGAATTCTGG ATCAACGCCG CTTCGCCGCC TTCCAAGCGC
GGTTTCGTGC TCGGCATCTA TGCGACGGTG CTTTCCCTTG GCTTCGCCGC CGGACCATTG
CTCTTTTCGA TCCTCGGCAG CGACGGTATT TTCCCCTTCC TGATCGGCGC CGCCGCCATC
CTGCTGGCCG CCATCCCGAT CTTCATCGCC CGCGACGAAA GCCCGGTGCT CGAGGAAAAA
CCGGAGCTGC ATTTCATGCG CTACGTTTTC CTGGTGCCGA CGGCGACGGC GGCGGTGTTC
ATCTTCGGCG CAGTCGAAGC GGGCGGGCTG TCGCTTTTTC CGATCTTTGC CGTGCGCGCC
CATTTCACCG AATCGCAGGC CGCACTGCTG CTCACCATGA TGGGCGTCGG CAACGTCATC
TTTCAGATTC CGCTCGGTCT GCTTTCCGAC CGCATCGCCG ACAAGCGGCC GCTTCTGGCC
GGCATGGCGC TGATGGGCTT CATCGGCTCG ATGATGTTAC CGCTGCTGCT CAACAACTGG
CTGCTGATGG CCGGGCTCCT GCTTTTCTGG GGCGGCTGCG TCTCAGGCCT CTATACGGTC
GGCCTCAGCC ATCTCGGCTC GCGGCTGACC GGCTCCGATC TTGCGGCAGC CAATGCTGCC
TTTGTCTTCT GTTATGCGAT GGGAACCGTG GCCGGGCCGC AGGCGATCGG CGCGGCGATC
GATGTCGCTG GAAATAACGG TTTTGCCTGG GCGATTGCGG CTTTCTTCGG TCTTTACGCC
CTACTTTCCG GCATCAGACT GATGTTCATT CGAAAACGGG CTTGA
 
Protein sequence
MSQPRTGTPG DVEEIHWPSL VAAISSISAV GIAIGLGLPL LSIILEKRGI SSTLIGLNTA 
MAGVAAMAAA PVTTRLAHKY GVAPTMLWAV LISALSALGF YYAQDFWMWF PLRFAFHGAT
TTLFILSEFW INAASPPSKR GFVLGIYATV LSLGFAAGPL LFSILGSDGI FPFLIGAAAI
LLAAIPIFIA RDESPVLEEK PELHFMRYVF LVPTATAAVF IFGAVEAGGL SLFPIFAVRA
HFTESQAALL LTMMGVGNVI FQIPLGLLSD RIADKRPLLA GMALMGFIGS MMLPLLLNNW
LLMAGLLLFW GGCVSGLYTV GLSHLGSRLT GSDLAAANAA FVFCYAMGTV AGPQAIGAAI
DVAGNNGFAW AIAAFFGLYA LLSGIRLMFI RKRA