Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1384 |
Symbol | |
ID | 8012477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1370285 |
End bp | 1371469 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644823969 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002975215 |
Protein GI | 241204119 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.381678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAC CGAGAACCGG CACACCGGGC GATGTCGAAG AAATCCATTG GCCTTCTCTG GTGGCAGCCA TCTCGTCCAT ATCCGCCGTC GGCATAGCAA TCGGCCTCGG TCTGCCCCTC CTCAGCATCA TTCTCGAAAA ACGCGGCATC TCGTCCACCC TGATCGGGCT CAACACGGCG ATGGCCGGGG TCGCGGCGAT GGCCGCCGCA CCTGTTACCA CCAGGCTTGC CCATAAATAC GGCGTTGCGC CGACAATGCT CTGGGCCGTG CTGATTTCGG CGCTGAGCGC GCTCGGTTTC TATTACGCCC AGGATTTCTG GATGTGGTTT CCGCTGCGTT TCGCATTTCA TGGCGCGACG ACGACGCTGT TCATCCTCTC CGAATTCTGG ATCAACGCCG CTTCGCCGCC TTCCAAGCGC GGTTTCGTGC TCGGCATCTA TGCGACGGTG CTTTCCCTTG GCTTCGCCGC CGGACCATTG CTCTTTTCGA TCCTCGGCAG CGACGGTATT TTCCCCTTCC TGATCGGCGC CGCCGCCATC CTGCTGGCCG CCATCCCGAT CTTCATCGCC CGCGACGAAA GCCCGGTGCT CGAGGAAAAA CCGGAGCTGC ATTTCATGCG CTACGTTTTC CTGGTGCCGA CGGCGACGGC GGCGGTGTTC ATCTTCGGCG CAGTCGAAGC GGGCGGGCTG TCGCTTTTTC CGATCTTTGC CGTGCGCGCC CATTTCACCG AATCGCAGGC CGCACTGCTG CTCACCATGA TGGGCGTCGG CAACGTCATC TTTCAGATTC CGCTCGGTCT GCTTTCCGAC CGCATCGCCG ACAAGCGGCC GCTTCTGGCC GGCATGGCGC TGATGGGCTT CATCGGCTCG ATGATGTTAC CGCTGCTGCT CAACAACTGG CTGCTGATGG CCGGGCTCCT GCTTTTCTGG GGCGGCTGCG TCTCAGGCCT CTATACGGTC GGCCTCAGCC ATCTCGGCTC GCGGCTGACC GGCTCCGATC TTGCGGCAGC CAATGCTGCC TTTGTCTTCT GTTATGCGAT GGGAACCGTG GCCGGGCCGC AGGCGATCGG CGCGGCGATC GATGTCGCTG GAAATAACGG TTTTGCCTGG GCGATTGCGG CTTTCTTCGG TCTTTACGCC CTACTTTCCG GCATCAGACT GATGTTCATT CGAAAACGGG CTTGA
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Protein sequence | MSQPRTGTPG DVEEIHWPSL VAAISSISAV GIAIGLGLPL LSIILEKRGI SSTLIGLNTA MAGVAAMAAA PVTTRLAHKY GVAPTMLWAV LISALSALGF YYAQDFWMWF PLRFAFHGAT TTLFILSEFW INAASPPSKR GFVLGIYATV LSLGFAAGPL LFSILGSDGI FPFLIGAAAI LLAAIPIFIA RDESPVLEEK PELHFMRYVF LVPTATAAVF IFGAVEAGGL SLFPIFAVRA HFTESQAALL LTMMGVGNVI FQIPLGLLSD RIADKRPLLA GMALMGFIGS MMLPLLLNNW LLMAGLLLFW GGCVSGLYTV GLSHLGSRLT GSDLAAANAA FVFCYAMGTV AGPQAIGAAI DVAGNNGFAW AIAAFFGLYA LLSGIRLMFI RKRA
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