| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1268 |
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| Symbol | |
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| ID | 8012371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1247848 |
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| End bp | 1249164 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644823849 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002975099 |
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| Protein GI | 241204003 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0129609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.16912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATCA CGCCGCATGA CGAACGTTTC ATGGCGGCGG CGATCCGCCT GTCGCGCTGG
CACCTCGGCC GCACCGCCAC CAACCCCTCC GTCGGCTGCC TGATCGTCAG GGGCGGCGTC
ATCGTCGGCC GTGCCGTGAC CGCCCTTGGC GGCCGCCCGC ATGCCGAGAC GCAAGCGCTC
GCTGAGGCCG GCGCGCTCGC CCGCGGCGCC ACCGCTTATG TGACGCTCGA ACCCTGCTCG
CATCACGGCA AGACGCCGCC CTGTTCCCAG GCGCTGATCG CTTATGGCGT TGCCCGCGTC
GTCATCAGCG TCACCGATCC CGATCCGCGG GTTTCCGGCC GCGGCATCGC CATGCTGCGC
GAAGCCGGCA TAGAGGTGGA TACCGGCGTG CTGGAGGCGG AAGGCAGGCA CTCGCTTGCC
GCCTATCTCA CCCGCCAGAC GAAGAACCGG CCCTATGTGA CTCTCAAGCT TGCCGTTTCC
GCCGATGGCA TGATCGGCCG CGAGGGGGCA GGGCAGGTGG CAATAACAGG CCCGGAGGCC
CGCGCCCAGG TGCAGGCGCT GCGCGCCGAA ACCGATGCGA TCCTCGTCGG CATCGGTACC
GCGATTGCGG ATGATCCGCT GCTGACGGTG CGTTCGCCAG GTCTTGAATC GCAATCGCCG
ATCCGCATCG TCCTCGATCC TTCCCTGGCA TTGCCGCTGA CCAGCAAGCT CGTCGAGACT
GCGCGGGAAG TGCCGGTCAT CGTGGTGGCG AGTGAGGAAG TGTGGCCGTT GTCGGCGGAT
GCCGAGGGGT TACCCCCCTC TGCCCTGCCG GGCATTTCCC CCACAAGGGG GGAGATCGGC
AAGGAGCCTG CTCCGCGTTC TCCAGCTTCC GATGATGATG GTTTCGCCTC CAGGCAAGAT
GTGGGGCAAG AGGCTAGCCC CCAGCCAATC TCCCCACCTG TGGGGGAGAT GCCCGGCAGG
GCAGAGGGGG GCATCCCACC CACAGATCCC ACAGACATGG AATCCCGCCG CGCAGCCCTC
GAAGCCGCCG GCGTCGAGGT CGTCCATTGC AATCCCTATC ATCCGGAAGT CCTGTTGCCG
GCACTCGCGA CGCGCGGTAT TTCCTCGCTT CTGGTCGAGG GCGGTGCAAA GACGGCGCGG
CTTTTCCTCG AGGCTGGCCT TGTGGACCGC ATCCAGCTTT ATCAGGCGCC TGTTGTGATC
GGCGAGGGCG GTATTGAATC TCCGCTTGAT GCAACCGACA TACCATCGGG TTTTGCCCAT
ACGGGCACGC TGATGTTCGG CGGCGATCGC CTGGACGAAT ACGAAAGAGG GCTTTGA
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| Protein sequence | MRITPHDERF MAAAIRLSRW HLGRTATNPS VGCLIVRGGV IVGRAVTALG GRPHAETQAL
AEAGALARGA TAYVTLEPCS HHGKTPPCSQ ALIAYGVARV VISVTDPDPR VSGRGIAMLR
EAGIEVDTGV LEAEGRHSLA AYLTRQTKNR PYVTLKLAVS ADGMIGREGA GQVAITGPEA
RAQVQALRAE TDAILVGIGT AIADDPLLTV RSPGLESQSP IRIVLDPSLA LPLTSKLVET
AREVPVIVVA SEEVWPLSAD AEGLPPSALP GISPTRGEIG KEPAPRSPAS DDDGFASRQD
VGQEASPQPI SPPVGEMPGR AEGGIPPTDP TDMESRRAAL EAAGVEVVHC NPYHPEVLLP
ALATRGISSL LVEGGAKTAR LFLEAGLVDR IQLYQAPVVI GEGGIESPLD ATDIPSGFAH
TGTLMFGGDR LDEYERGL
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