Gene Rleg_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1253 
Symbol 
ID8012356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand+ 
Start bp1233597 
End bp1234229 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID644823834 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002975084 
Protein GI241203988 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0477994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAATA GCCGAGACGT GGAAAATTCT ACCGCCCGCC GCCGCGGCCG TCCGCCGGCC 
TTCGACCGCG AGACAGTGCT GTCGGCTGCC CGCGAGACCT TCTGGGCGCA TGGATATGAG 
GGCGCCTCGA TCGCCGATCT CACTGCCGCC ATGGGCATCA CGCCGCAAAG CCTCTATGCC 
GCCTTCAACT CGAAGGCCGA TCTCTATCGC GCGGCGCTGG AGCAATACCG AGCGCTAGGT 
TCCGACACGT TTTCCGCGCT TGGCGAGCCG ATCGACACCG TCTCCACCTT CGAGCGCATA 
TTGCGGGGCT CGGCCGCGAT CTTCTCGGCT CCGGAGCATC CGAAAGGCTG CATGATCTCG 
ACGGCTGTGC TGAACTGCGC CAGCGAGAAT GCCGTGATCG CCGACCATGT CGCAGCGATG 
CGCCGTCGGT CGCTGGACGC TTTCACGGCG AGGATCGAGC GTGGCATCCG CGAGGGCGAC 
ATGAAGTCCG AGACGAACCC CCGCGCGCTG GCACGGTTTC TCTGTGCCAT CGTCCAGGGC 
ATGTCGGTGC AGGCGAGGGA CGGCGCATCG CTAGAGGAAT TGTTTGATAT CGCAGTCCTC 
GCCATCGCCG AGGTTGCCCG TCACCGCGCC TAA
 
Protein sequence
MKNSRDVENS TARRRGRPPA FDRETVLSAA RETFWAHGYE GASIADLTAA MGITPQSLYA 
AFNSKADLYR AALEQYRALG SDTFSALGEP IDTVSTFERI LRGSAAIFSA PEHPKGCMIS 
TAVLNCASEN AVIADHVAAM RRRSLDAFTA RIERGIREGD MKSETNPRAL ARFLCAIVQG 
MSVQARDGAS LEELFDIAVL AIAEVARHRA