Gene Rleg_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1249 
Symbol 
ID8012353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1227543 
End bp1228688 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content63% 
IMG OID644823830 
Productribonuclease D 
Protein accessionYP_002975080 
Protein GI241203984 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.606694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0871939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA CCACCGCCGA TTTGGCGGCC GCCTGCAAAG AGCTGGCCAA GTCCGACTTC 
ATCACCATCG ACACCGAATT CCTGCGCGAA ACGACCTTCT GGCCGGAGCT CTGCCTGATC
CAGATGGCAA GCCCGAGGAC GGAAGTTCTC GTCGATCCGC TGGCCAAGGG CATCGATCTC
GCCCCCTTCT TCGAGCTGAT GGCCGATACG AAGGTGCTGA AGGTCTTTCA CGCGGCGCGC
CAGGACATCG AAATCATCTT CAATCGCGGC AATCTCATTC CGCATCCGAT CTTCGACACG
CAGGTCGCCG CCATGGTCTG CGGCTTCGGC GACAGCGTCT CCTATGACCA GTTGGTCAGC
CGCATCAAGA ACGTCCATAT CGACAAGTCG TCGCGCTTCA CCGACTGGAG CCGCCGGCCG
CTCTCGGACA AACAGCTCGA TTATGCGCTG GCTGACGTCA CCCACCTGCG CGACGTCTAC
CTGTCACTGA AGGCGGAACT CGATCGCGAA GGCCGCAGCT CCTGGCTCTC CGAGGAAATG
GACATTCTCG AGTCGCGCGA AACCTACGAC ATGCATCCCG ACGATGCCTG GCAGCGGCTG
AAGATGCGCC TGCGCAAGCC GCAGGAGCTG GCGATCCTGA AATATGTCGC CGCCTGGCGC
GAACGCGAGG CGCGCGCCCG CAACGTGCCG CGTTCGCGGG TGCTGAAGGA TGATGCGATC
TACGAGATCG CCCAGCAGCA GCCCAAGGAT ACCGAGGCGC TCGGCCGTCT GCGCACCATT
CCGAAGGGTT GGGAGCGCTC GACTTCCGGC GCCGCGGTCA TCGAGGCCGT CAACACCGCT
CTTGCTCTTC CGAAGGCCGA TATGCCGCAT GTACCGCGCC AGGCGCAGGC GCCCGAGGGG
GCCGCTGCTG CCGTCGAATT GCTGAAGGTG CTGCTGAAGC TGATATCGGA AAAACACGGC
GTGGCGCCGA AGGTGATCGC CAACAGCGAG GATCTCGACA AGATCGCCGC CGAGGGCGAG
AAGGCCGAAG TCGCCGCCCT GCACGGCTGG CGGCGCGATC TTTTCGGCGA GCCGGCACTG
CAACTGATCC AGGGCGCGAT CGCTCTGCGC TTCGTCGACC GGAAGGTCGA AACCGTCAGC
CTCTGA
 
Protein sequence
MIETTADLAA ACKELAKSDF ITIDTEFLRE TTFWPELCLI QMASPRTEVL VDPLAKGIDL 
APFFELMADT KVLKVFHAAR QDIEIIFNRG NLIPHPIFDT QVAAMVCGFG DSVSYDQLVS
RIKNVHIDKS SRFTDWSRRP LSDKQLDYAL ADVTHLRDVY LSLKAELDRE GRSSWLSEEM
DILESRETYD MHPDDAWQRL KMRLRKPQEL AILKYVAAWR EREARARNVP RSRVLKDDAI
YEIAQQQPKD TEALGRLRTI PKGWERSTSG AAVIEAVNTA LALPKADMPH VPRQAQAPEG
AAAAVELLKV LLKLISEKHG VAPKVIANSE DLDKIAAEGE KAEVAALHGW RRDLFGEPAL
QLIQGAIALR FVDRKVETVS L