| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1242 |
|---|
| Symbol | |
|---|
| ID | 8012347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1217590 |
|---|
| End bp | 1218714 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644823823 |
|---|
| Product | protein of unknown function UPF0118 |
|---|
| Protein accession | YP_002975073 |
|---|
| Protein GI | 241203977 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.4957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00297495 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAGC AAGTCAGTGG GAACATTCTC AAGCGTCAGA TCTTCTTCTG GCTGGCGGCG
CTCGTCTTTT TCATCGCCTT CCTTTATGTC TTCAGCTCGA TCCTGTTGCC CTTCATCGCC
GGCATGGCGA TCGCCTATTT CCTCGATCCG GTGGCCGACC GGCTGGAGCG GCTGGGTCTG
AGCCGCATGA TGGCGACCAT CGGCATTCTC GTTGCCTTCG TCATCGTCTT CGCGCTGGCG
CTGATGATCC TCATTCCGGT GCTGATCAGC CAGTTCAACG ATTTCGCTCA ACGTCTGCCG
GGTTATATCA GCCAATTGCA GCAGTTCATC ACGCAGGCGC AGAATTCGCT GCTGCCGGAC
TGGGTCGAGA ACCAGATGGG CGCGATCAAG GACAATCTCT CCGGCATCCT GTCGGAGGGC
ATGGGCTTCC TCACCGGGCT CTTTGCGCAG ATCTGGAATT CCGGCAAGGC GATCGTCGAC
GTCATATCGC TGCTTGTGGT CACCCCCGTC GTCGCCTTCT ACATCCTGCT CGATTGGGAC
CGTATGGTCG CCAAGGTCGA TCAGTGGATC CCGCGCGATT ATGTCAGCGA TGTTCGCCAG
ATCGCCAAGG AGATTGACCA GGCAATCGCC GGTTTCATTC GCGGCCAGGG CTCGCTCTGC
CTCATCCTCG GCATCTATTA TGCCGTCGGC CTTTCTCTCG TCGGGCTGAA TTTCGGCCTG
CTGATCGGCC TCTTCGCCGG CATGATCAGT TTCATTCCCT ATGTCGGCTC GATGGTTGGC
CTCGTGCTCG CCATCGGCGT GGCGCTTGTG CAGTTCTGGC CCGATTATCC GTGGATCGGG
CTGGTGCTCG TCGTCTTCTT CAGCGGTCAG TTCCTCGAGG GCAACATTCT GCAGCCGAAG
CTCGTCGGCT CCAGCGTCGG CCTGCATCCG GTCTGGCTGA TGTTTGCGCT GTTTGCCTTC
GGCGCGCTCT TCGGTTTCGT CGGGCTTCTG GTTGCGGTGC CGGCGGCTGC GGCCGTCGGC
GTCCTTGTTC GTTTCGCGCT TTCGCGCTAC CTTCAGAGCG ATCTTTATTT TGGCGGGTCG
CCCAGTGGCC GCGCCCGGAA GACGAAATCA GTTCCCAATG AATGA
|
|---|
| Protein sequence | MPQQVSGNIL KRQIFFWLAA LVFFIAFLYV FSSILLPFIA GMAIAYFLDP VADRLERLGL
SRMMATIGIL VAFVIVFALA LMILIPVLIS QFNDFAQRLP GYISQLQQFI TQAQNSLLPD
WVENQMGAIK DNLSGILSEG MGFLTGLFAQ IWNSGKAIVD VISLLVVTPV VAFYILLDWD
RMVAKVDQWI PRDYVSDVRQ IAKEIDQAIA GFIRGQGSLC LILGIYYAVG LSLVGLNFGL
LIGLFAGMIS FIPYVGSMVG LVLAIGVALV QFWPDYPWIG LVLVVFFSGQ FLEGNILQPK
LVGSSVGLHP VWLMFALFAF GALFGFVGLL VAVPAAAAVG VLVRFALSRY LQSDLYFGGS
PSGRARKTKS VPNE
|
|---|
| |