| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1236 |
|---|
| Symbol | |
|---|
| ID | 8012342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 1210611 |
|---|
| End bp | 1211480 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644823817 |
|---|
| Product | protein of unknown function DUF519 |
|---|
| Protein accession | YP_002975067 |
|---|
| Protein GI | 241203971 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2961] Protein involved in catabolism of external DNA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.187373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000201181 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACC GCCACATTTA TCACGCGGGC AACTTTGCCG ATGTGCTGAA ACATGTCGTG
CTGACGCGGC TGATCCGCTA CATGCAGAAG AAGGATGGCG GGTTCCGCGT GCTCGACACG
CATGCCGGCA TCGGGCTCTA CGACCTCTCC TTGGAAGAAG CGCAGAAAAC CGGCGAATGG
CTCGATGGCA TCGGCAAGCT GATGGAGGCA GACCTCGGCC CTCAGGTTTC CGAACTGCTG
GAACCCTACC TCTCCGCAAT CCGCGAACTC AATCCGCAGG GCGGCATCCG TTTCTATCCC
GGATCGCCGA AACTTGCGCG CATGCTGTTC CGGCCGCAAG ATCGGCTGTC GGCGATGGAA
CTGCACCCCG AGGACTATGT CAGGCTGCAC CGGCTGTTCG AGGGCGATCA CCATGCCCGC
ATCACCGAGC TTGACGGCTG GCTGGCGCTC GGCGCGCATC TGCCGCCGAA GGAGAAGCGC
GGCATCGTCC TCGTCGATCC GCCCTTCGAG GAAGAGGACG AATATCAGCG GCTGGCCGAG
GGACTGGAAA AAGCCTACCG CCGCTTTCCC GGCGGCACCT ATTGCCTGTG GTATCCGCTG
AAAAAGGGCG CGCCGATCAA GGAATTCCAC GAGACGCTGC AGGCGCTCGA CATCCCGAAA
ATGCTCTGCG CCGAACTCGC CGTTCGCAGC GACCGCGGCA TTACGGGACT GACGGGCTCA
GGCCTCGTCA TCGTCAACCC GCCCTTCACG CTGAAGGATG AGTTGCACCA ATTGCTGCCC
GCATTGAAGG ATCATCTGGC GCAAGACCGT TTCGCCTCTC ACCGCGCCTT CTGGCTGCGT
GGCGAGAACA AGGCGGTCAA GGACGATTGA
|
|---|
| Protein sequence | MNYRHIYHAG NFADVLKHVV LTRLIRYMQK KDGGFRVLDT HAGIGLYDLS LEEAQKTGEW
LDGIGKLMEA DLGPQVSELL EPYLSAIREL NPQGGIRFYP GSPKLARMLF RPQDRLSAME
LHPEDYVRLH RLFEGDHHAR ITELDGWLAL GAHLPPKEKR GIVLVDPPFE EEDEYQRLAE
GLEKAYRRFP GGTYCLWYPL KKGAPIKEFH ETLQALDIPK MLCAELAVRS DRGITGLTGS
GLVIVNPPFT LKDELHQLLP ALKDHLAQDR FASHRAFWLR GENKAVKDD
|
|---|
| |